Opitutaceae bacterium TAV5: OPIT5_19980
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Entry
OPIT5_19980 CDS
T03683
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
obt
Opitutaceae bacterium TAV5
Pathway
obt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OPIT5_19980 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obt03019
]
OPIT5_19980 (groEL)
03110 Chaperones and folding catalysts [BR:
obt03110
]
OPIT5_19980 (groEL)
03029 Mitochondrial biogenesis [BR:
obt03029
]
OPIT5_19980 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obt04147
]
OPIT5_19980 (groEL)
Enzymes [BR:
obt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OPIT5_19980 (groEL)
Messenger RNA biogenesis [BR:
obt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OPIT5_19980 (groEL)
Chaperones and folding catalysts [BR:
obt03110
]
Heat shock proteins
HSP60 / Chaperonin
OPIT5_19980 (groEL)
Mitochondrial biogenesis [BR:
obt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OPIT5_19980 (groEL)
Exosome [BR:
obt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OPIT5_19980 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
OPIT5_19980 (groEL)
Exosomal proteins of breast cancer cells
OPIT5_19980 (groEL)
Exosomal proteins of colorectal cancer cells
OPIT5_19980 (groEL)
Exosomal proteins of bladder cancer cells
OPIT5_19980 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHF92187
LinkDB
All DBs
Position
complement(4690541..4692172)
Genome browser
AA seq
543 aa
AA seq
DB search
MAAKQLLFDEAARQKILRGVEVLARAVKVTLGPKGRNVVIDKKFGSPAVTKDGVTVAKEV
ELPDPYENIGAQLVKEVASKTNDSAGDGTTTATVLAEAVYKEGLKHVTAGANPIYLKRGI
DKAVEAAVADLAKASKKVNAREEIRQVATVSANWDTTIGEIIADAMDKVGKDGTITVEEA
KSIETTLDVVEGMQFDKGYLSPYFATNQESLEAVLEDAYVLIHEKKISSLNELLPLLQAV
SKTGKPLLIIAEDVEGEALAALVVNKIRGVLNVAAVKAPGFGDRRKAILEDIAVLTGGKL
LTEDLGIKLENVTVADLGKVKRVVIDKENTTIVEGAGKSSDIQGRVKQLRRQIDETTSDY
DREKLQERLAKLAGGVAVINVGAATESEMKEKKQRVEDALHATRAAVEEGIVSGGGVALL
RTAKAIDAVVATLEGDEKLGAGIIRRAVESPLKQLVANAGLEGAVVVQQVLSSKGSNGYN
VATGAYEDLVKAGVVDPTKVTRIALQNAASIAGLLLTTEAIITDAPEDKKAPAAPAPGGG
MDY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaaacaactcctcttcgatgaggccgcccgtcagaaaatcctccgtggtgtc
gaagtcctcgcccgcgccgtcaaggtcacccttggtcccaagggtcgcaatgtcgtcatc
gacaagaaattcggctcgcccgccgtcaccaaggacggcgtgaccgtcgccaaggaagtc
gagctgcccgatccctacgaaaacatcggcgcccagctcgtgaaggaagtcgcttccaag
accaacgactccgccggcgacggcaccaccaccgccaccgtgctcgccgaggccgtctac
aaggaaggcctcaagcacgtcaccgccggcgccaacccgatctacctcaagcgcggtatc
gacaaggccgtcgaggccgccgtcgccgatctcgccaaggcctccaaaaaggtcaacgcc
cgcgaggagatccgccaggtcgccaccgtctccgccaactgggacaccaccatcggcgag
atcatcgccgacgccatggacaaggtcggcaaggacggcaccatcaccgtcgaggaagcc
aagtccatcgagaccaccctcgacgtcgtcgaaggcatgcagttcgacaagggctacctc
tcgccctacttcgccaccaaccaggagagcctcgaagccgtcctcgaagacgcctacgtg
ctcatccacgagaagaagatcagctccctcaacgagctccttcctctcctgcaggcggtt
tccaaaacaggaaaacctctcctcatcatcgctgaagacgtcgaaggcgaagccctcgcc
gccctcgtggtgaacaagatccgcggcgtgctcaacgtggccgccgtcaaggctcccggc
ttcggcgaccgccgcaaggccatcctcgaagacatcgccgtcctcaccggcggcaagctc
ctcaccgaggacctcggcatcaagctcgagaacgtcaccgtggccgacctcggcaaggtc
aagcgcgtcgtcatcgacaaggaaaacaccaccatcgtcgaaggcgccggcaagtcgtcc
gacatccagggccgcgtcaagcagctccgccgccagatcgacgagaccaccagcgactac
gaccgcgagaagctccaggagcgcctcgccaagctcgccggcggcgtggccgtgatcaac
gtcggtgccgccaccgaatccgaaatgaaagagaagaagcagcgcgtcgaggacgccctc
cacgcgacccgcgcggccgtcgaggaaggcatcgtctccggcggcggcgtcgccctcctg
cgcaccgccaaggccatcgacgccgtcgtcgcgacgctcgaaggcgacgagaagctcggc
gccggcatcatccgccgcgcggtcgagtctcctctcaagcagctcgtggcgaacgccggc
ctcgaaggcgcggtcgtcgtccagcaggtgctctccagcaagggttccaacggctacaac
gtggccaccggcgcctacgaagacctcgtgaaagccggcgtggtcgacccgacgaaggtc
acccgcatcgcgctccagaacgcggcatccatcgccggtctcctcctcaccaccgaagcc
atcatcaccgacgctccggaagacaagaaggccccggccgcccccgcccccggcggtggc
atggactactga
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