Opitutaceae bacterium TAV5: OPIT5_20750
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Entry
OPIT5_20750 CDS
T03683
Name
(GenBank) rhamnogalacturonate lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
obt
Opitutaceae bacterium TAV5
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
OPIT5_20750
Enzymes [BR:
obt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
OPIT5_20750
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
BppU-like_C
Motif
Other DBs
NCBI-ProteinID:
AHF92316
UniProt:
W0J6A5
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All DBs
Position
4884187..4886142
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AA seq
651 aa
AA seq
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MSFWRRLPSLAVGLLLATGEVSLLAAGPGTGENLGRGLVAVRTGDTEVYVGWRFLDTDPD
DAGFNLYHSVSGGALVRLNDTPLVATTDWHGTLPEKAFSTGISWFVRPVSGGVEQPASAP
FVLPAHAPVEPFLRIPLEIPPAGKIPAGESYTYAANDVSIGDLDGDGSYEFVVKWDPSNA
KDNSQAGITGNVYLDGVTLAGRRLWRIDLGRNIRAGAHYTQFIVYDFDGDGRAELAVKTA
PGTLDGRGRPVLLPGDRADADYRNEAGYILSGPEYLTVFDGLTGGALATVPWVVPRHPAT
RNPSPDQLKAVWGDGYGNRVDRFLAGLAWLDGERPSFIMARGYYTRTAVAAWDWRGGRLS
RRWLFDTLGHPEFSRYAGQGNHQLSVADVDSDGRQEIVYGSMAINADGTGRYATGLGHGD
ALHVGKFDRTRPGLQVYAVHENIAGNGGTGTTFRDAATGEVLWSTPATRDVGRGVIMDID
PRHPGAEAWATNNGNIYSAAGEVIAQKPKKMPVNFGVWWDADPLRELLDGTTISKWDPVA
SRLSVLLDTSVWGAAANNGTKATPAFAGDILGDWREEVVWRNTGSTALLLFTTTLPAAGR
LRTFLQDRQYRAALAGQNVGYNQPPHPSFFVGHGMENPQEPFVENTRKNEK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctggcgacgtctcccgtcgcttgctgtcggcctcctgctggccaccggcgag
gtttctctccttgccgccggtcctggcaccggggaaaaccttggtcgtggcctcgtggcc
gtccggacgggagacacggaggtttacgtcggctggcggttcctcgacaccgacccggac
gacgccggatttaacctataccactctgtcagtggaggggctctcgtcaggctcaacgac
actccgctcgtcgccaccaccgactggcacggcacactgccggagaaggcattttcgaca
ggcatttcctggttcgttcgcccggtgagcggcggcgtcgaacagcccgcaagcgccccc
ttcgtccttcccgctcatgcgccggtggagccttttctccgcattccgctggagattcct
cccgcggggaaaattccggcgggcgagagctacacctatgcggccaacgacgtctccatc
ggcgacctcgacggcgatggcagctacgagttcgtcgtcaagtgggacccttccaatgcg
aaggacaattcgcaggccggcatcaccggcaacgtgtaccttgacggcgtcacccttgcc
ggccgccgtctctggcgcatcgacctcgggcgcaatatccgggcgggcgcgcattacacg
cagttcatcgtttacgatttcgacggcgatggccgtgccgaactcgccgtcaagactgct
cccggcactctcgacggccgtggccggccggtcctgctgcccggagaccgcgccgatgcc
gattatcgtaacgaggccggctatatcctttccggtccggaatacctgaccgttttcgac
ggcctcaccggcggcgcgctcgccaccgttccgtgggtggtgccgcggcatccggcgacc
cgcaatccctcgcccgatcagctcaaggcggtgtggggcgacggttacggcaatcgtgtg
gatcgtttcctcgccgggctcgcatggctcgacggcgagcgaccctcgttcatcatggcg
cgtggctactacacgcgcaccgccgtggccgcgtgggactggcgcggcgggcgcctctcc
cgccgctggcttttcgacacgctcggccatcccgaattctcccgctacgccggccaaggc
aaccaccagctttccgtggccgatgtcgatagcgacggccgtcaggaaatcgtctacggg
tccatggcgatcaacgccgacggcaccggacgctacgccaccggcctcggtcatggagac
gctctccacgtcggcaagttcgatcgaacccgtcccggcctccaggtttacgcggtccac
gaaaacattgccggcaatggcggcaccggcaccacctttcgagacgccgccacgggtgag
gttctctggtccactccagccacccgcgacgtcggacgcggcgtcatcatggatatcgat
ccccgccatcccggcgccgaggcgtgggcgaccaacaacggtaacatctattcggcggcc
ggcgaggtgatcgctcaaaaaccgaaaaaaatgccggtcaacttcggcgtctggtgggat
gccgacccgctgcgcgaactcctcgatggcacgacaatcagcaaatgggatccggtcgcc
tcgcgcctttctgtcctgctcgacacctcggtttggggcgcggcggccaacaacggcacc
aaggccacgccggcctttgccggcgacatcctcggcgactggcgcgaggaggtcgtctgg
cgcaacaccggcagcaccgcgctcctgctcttcacgacgaccctgcccgccgccggccgc
ctgcgcacgtttctccaggatcgccagtatcgggccgcgctcgccgggcagaatgtcggc
tacaaccagccgccgcatccttccttcttcgtcggtcatggcatggaaaatccgcaggag
cctttcgtggaaaatacacggaaaaatgaaaaatag
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