Opitutaceae bacterium TAV5: OPIT5_21595
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Entry
OPIT5_21595 CDS
T03683
Name
(GenBank) RNA-binding protein S4
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
obt
Opitutaceae bacterium TAV5
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obt03009
]
OPIT5_21595
Enzymes [BR:
obt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
OPIT5_21595
Ribosome biogenesis [BR:
obt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OPIT5_21595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AHF92463
UniProt:
W0J634
LinkDB
All DBs
Position
complement(5093096..5093995)
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AA seq
299 aa
AA seq
DB search
MPDHPTIRLQKFLADAGVCSRRAAETLISDGDVWVNAQPATLGQKINPETDKITVRGKSV
RPVAQPRLTLAMHKPRGLVCSHDDPHNPDTVYDLIPRELARYRFFCAGRLDKDSEGLLIL
TTDGDLAHRLMHPSTDVVKRYHVVLGEPYSAKKIGKLLRGVTIEGEKLKVEYAALVNPNA
QDLSTSLDVHLHHGKKREIRQLFMALGHEVKRLRRYQIGAFPLRGIPMRAMKLLNDKEIA
TLFARPGLQPANTRRRYTRPKTAAPGSSRQSPAGGKSSGKRSTHPAKKRAGQSRSRHAR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaccacccaacaatccgcctgcaaaagttcctcgccgacgccggcgtctgttcc
cgacgcgccgccgagacgctcatctccgacggcgatgtctgggtcaacgcgcagcccgcc
accctcggccagaaaatcaaccccgagacggacaagatcaccgtccgcggcaagtccgtg
cgccccgtcgcccagccccggctcaccctcgccatgcacaagccccgcggcctcgtctgc
tcgcacgacgacccgcacaatcccgacaccgtctatgatctgatcccgcgcgaactcgcc
cgctaccgctttttctgcgccggccgcctcgacaaggacagcgagggcctgctcattctc
accaccgacggcgacctcgcccaccggctcatgcacccgagcaccgatgtcgtgaagcgt
taccacgtcgtcctcggcgagccctattctgccaaaaaaatcggcaagctcctgcgcggc
gttaccatcgagggcgaaaagctcaaggtcgagtacgccgctctcgtcaatcccaacgcc
caggacctctccaccagcctcgacgtccacctgcatcacggcaagaagcgcgagatccgc
cagctcttcatggccctcgggcacgaagtgaagcgcctccgccgctaccagatcggcgcc
ttccccttgcgcggcatcccgatgcgcgccatgaagttgctcaacgacaaggaaatcgcc
accctcttcgcccggcccggcctgcaacccgccaacacccgccgccgctacacccgcccc
aaaaccgccgcgcccggctcctcccgccaatcccccgccggcggcaaatcctccggcaaa
cgctccactcatccggccaaaaaacgtgccggacaatcccgttcccgtcacgcacggtaa
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