Opitutaceae bacterium TAV5: OPIT5_23505
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Entry
OPIT5_23505 CDS
T03683
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
obt
Opitutaceae bacterium TAV5
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obt03036
]
OPIT5_23505
Chromosome and associated proteins [BR:
obt03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
OPIT5_23505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
BLOC1_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AHF92726
UniProt:
W0J7H2
LinkDB
All DBs
Position
complement(5536242..5540270)
Genome browser
AA seq
1342 aa
AA seq
DB search
MHLKALKLHGFKSFADPTTLRFEPGVTAIVGPNGCGKSNVADSIRWVLGEQSAKALRGGK
MQDVIFEGADTRKPAQMCEVSLVLTDCEKQLGSEFHEIEIMRRVYRDGGGEYFFNGQACR
LKDIQKLFMDTGIGRTSYSIMAQGQIDQILSSKPEERRAVFEEAAGITKYKSQRKEALQK
LALTDQNLVRVADVVGEVGRQIGSLRRQASKALRYKKLSWRLRHLALAHHGYHHAQVSAT
LATLEEQVIKLRASAETRRVHLQQQQSALEEQKAHRSRLNQRVQEAQQAVFDLRSEKEQA
ENAANLSQIKRTGLLERLESSRVNLNELEMQIRELATQVDSGAQDKQQQLTLLGSSDAVF
QDRNRELGVVEAELQTLDQELQQTKFQLLQFESNVARLRTDATSYEVDQKTSAQRHEALA
ADVEAIRQQQAAAAQNVSDRAQQTEEAQVAISRARQESQDAQASLAELTREFRDAQKKLQ
EIDRVLAQRTARLKLLQQLQEKWEGFGEGAKAILQGRLAPALGGTTATPVSRDLEVRPEY
AKAIESLLGSAVEAIHVADLATAQRILAELETGQIGAAVLQVAVPGIDQRPEAGPGGAGV
QPVDGGEAAAHATPVAAPLPPGLQPAAAALADRDPELPPPPVVALLGSCYIADDLHAFLD
YWHAHPDFQFLAVATRKGEIVDRRGLVFGGYSKKPGNSIVQREIDLRETARQLAEDQKQH
DEQRAIIDAINARLAEAETTIEQKRQEVLDATEALASAQTEERSAGRAYEEIVTRATRME
NELQALEAARHETQARFERAREQLAEGEQAVEAGRVRIHELETRTAELRTARDVKRETLA
QARLELAEHRQRVEVLDRGLADMERRRSQLNEVHIQRQQEIETWTTQIDQLETEAEGQRA
RSAQIAETLVVAQQQVEQIRAELVEVERAIGSVESSQDGIRTDAEKSAADLNRCEIDLAQ
NQSRARFIEEDVQREFQIRVGTWDWRAMLYRHDDDPPDLQTLDLDEDDEDAPATSNSESG
SDSGAGVSPADGEAAGSGGTGFQPVDGGEVAAAPSPSAATAETAAVPAPPVRRRRKRGPK
SDPTEIDLEKIADAHTGDAAPAAWQAVKTEIDALRQRLAGMGAVNTGAIEEYAELKQRYD
FLRTQSDDLTHAKADLLKTIDEINQTSMEQFQITFDQIKKNFIYTFQTLFGGGVANLELV
VTDDILESGIEITAQPPGTKLKSITLLSGGQKTLTAVALLFALYMVKPSPFCLLDELDAP
LDESNIGRFTDLLKKFIDSSQFIIITHNKRTVAAAHAIYGVTMEERGVSKTVSMKFSHLR
GDIEPQPENIAEAVRGTRLATA
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcaaggcgctcaagctccacggtttcaagtccttcgctgatccgaccactctc
cgcttcgaacccggagtcacggccatcgtgggtcccaacggctgcggcaagtccaatgtc
gccgactccatccgctgggtgctcggcgaacagagcgccaaggccttgcgcggcggcaag
atgcaggatgtcatcttcgagggcgccgacacccgcaagcccgcccagatgtgtgaagtc
tcgctcgtcctcaccgactgcgaaaagcagctcggcagcgaattccacgaaatcgagatc
atgcgccgcgtctatcgcgacggcggcggcgaatattttttcaacggccaggcctgccgc
ctgaaggatatccagaagctcttcatggacaccggcatcggccggaccagctactcgatc
atggcccagggccagatcgaccagatcctctcctccaagcccgaggaacgccgcgccgtc
ttcgaggaggccgccggcatcaccaagtacaaatcccagcgcaaggaggccctgcaaaaa
ctcgccctcaccgaccagaatctcgtccgcgtggccgatgtcgtcggcgaagtcgggcgc
cagatcggttccctccgccgccaggccagcaaggccctccgctacaaaaaactctcctgg
cgcctccgccacctcgccctcgcccaccacggctaccatcatgcgcaggtcagcgccacc
ctcgccacgctcgaggagcaggtgatcaagctccgcgcctccgccgaaacccgccgcgtc
cacctccagcagcagcaatccgcgctcgaggagcaaaaagcccaccgctcccgcctcaac
cagcgcgtgcaggaagcccagcaggccgttttcgacctccgctccgaaaaagagcaggcc
gagaacgccgccaacctctcgcagatcaagcgcaccggcctcctcgaacgcctcgaatcc
tcccgcgtcaacctcaacgagctcgagatgcagatccgcgagctcgccacccaggtcgac
agcggcgcgcaggacaaacaacaacaactcaccctcctcggcagctccgacgccgtcttc
caggaccgcaaccgcgagcttggcgtagtcgaagcggaactacagacgctcgatcaggag
ctccagcagaccaaattccagctcctccagttcgaaagcaacgtcgcccgcctccgcacc
gacgccaccagctacgaggtcgaccagaaaacctccgcccagcgccacgaagccctcgcc
gccgatgtcgaggccatccgccagcagcaggccgccgccgcgcaaaacgtttccgaccgc
gcgcagcaaaccgaggaagcccaggtcgccatcagccgcgcccggcaggaatcgcaggat
gcccaggccagcctcgccgagctcacccgcgaatttcgcgacgcgcaaaaaaagctccag
gagatcgaccgcgtcctcgcccagcgcaccgcccgcctcaagctcctccagcaactccag
gaaaaatgggaaggcttcggcgaaggcgccaaggccatcctccagggccgcctcgctcct
gccctcggcggcaccaccgccaccccggtcagccgcgacctcgaagtccgccccgaatac
gccaaggccatcgagtcgctcctcggctccgccgtcgaagccatccacgtcgccgacctc
gccaccgcgcaacgcatcctcgccgaactcgaaaccggacaaatcggcgccgccgtcctc
caggtcgccgtgccgggaatcgaccagagaccagaggccggaccgggtggcgcgggcgtc
cagcccgtggacggcggcgaagccgccgcccacgccactcctgtcgccgcccctctcccc
cccggcctgcagcccgccgccgccgccctcgccgaccgcgatcccgagctcccgcccccc
cccgtcgtcgcgctcctcggttcctgctacatcgccgacgacctccacgccttcctcgac
tactggcacgcccaccccgatttccagttcctcgccgtcgccacccgcaagggcgaaatc
gtcgaccgccgcggtctcgtcttcggtggctactcgaaaaaacccggcaacagcatcgtc
cagcgcgaaatcgacctccgcgaaaccgcccgccagctcgccgaggaccagaagcagcac
gacgagcagcgcgccatcatcgacgccatcaacgcccgtctcgccgaagccgagaccacc
atcgaacaaaaacgccaggaagtcctcgacgccaccgaagcgctcgcctccgcccagacc
gaggagcgcagcgccggccgcgcctacgaagagatcgtgacccgcgccacccgcatggag
aacgaactccaggccctcgaagccgcccgccacgagacgcaggcccgcttcgaacgcgcc
cgcgaacaactcgccgaaggcgaacaggccgtcgaagccggccgcgttcgtatccacgaa
ctcgagacgcgcaccgccgaactccgtactgcgcgcgacgtcaagcgcgagaccctcgcc
caggcccgcctcgaactcgccgagcaccgccagcgcgtcgaagtcctcgatcgcggcctt
gccgacatggagcgccgccgcagccagctcaacgaagtccacatccagcgccagcaggag
atcgagacctggaccacgcagatcgaccagctcgagaccgaggccgaaggccagcgcgcc
cgctccgcgcaaatcgccgagaccctcgtcgtcgcccagcagcaagtggagcagatccgc
gccgagctggtcgaagtcgagcgggccatcggcagcgtcgaatcctcgcaggacggcatc
cgtaccgatgccgaaaaatccgcggccgatctcaaccgctgcgagatcgacctggcccag
aaccagtcccgagcccggttcatcgaggaagacgtgcaacgcgaattccagatccgcgtc
ggcacctgggactggcgcgccatgctctaccgccacgacgacgatccccccgacctccag
accctcgacctcgacgaggacgacgaagacgcaccggccaccagtaatagtgaaagtggc
agtgacagtggcgcgggcgtctcgcccgcagacggcgaagccgccggatcgggtggcacg
ggcttccagcccgtggacggcggcgaagtcgccgccgccccctccccgtccgccgccacc
gccgaaaccgcagccgtccccgctcctcccgtccgccgtcgccgcaagcgcgggcccaaa
tccgaccccaccgaaatcgacctcgagaaaatcgccgacgcccacaccggcgacgccgct
cccgccgcctggcaagccgtcaagacggagatcgacgccctccgccagcgccttgccggc
atgggcgccgtcaacaccggggccatcgaggaatacgccgagctcaagcaacgctacgac
ttcctccgcacccagagcgacgacctcacccatgccaaggccgacctgctaaaaaccatc
gacgagatcaaccagacctcgatggagcagttccagatcaccttcgaccagatcaagaaa
aacttcatctacaccttccagaccctcttcggcggcggcgtcgccaaccttgaactcgtc
gtcaccgacgacattctcgaatccggcatcgaaatcaccgcccagccgcccggcaccaag
ctcaagtccatcaccctcctctccggcggccagaaaaccctcaccgccgtcgccctcctt
ttcgccctctacatggtcaagccctcccccttctgtctcctcgacgaactcgacgccccc
ctcgacgagtccaacatcggccgtttcaccgatctcctcaaaaagttcatcgactcctcc
cagttcatcatcatcacgcacaacaaacgcacggtcgccgccgctcacgccatctacggc
gtcaccatggaagaacgcggcgtctcgaaaaccgtttcgatgaaattcagccacctccgg
ggcgacatcgagccccagcccgaaaacatcgccgaagccgtccgcggcacccgcctcgcc
accgcctga
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