Opitutaceae bacterium TAV5: OPIT5_27065
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Entry
OPIT5_27065 CDS
T03683
Name
(GenBank) type IV secretion protein Rhs
Organism
obt
Opitutaceae bacterium TAV5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
AHF93332
LinkDB
All DBs
Position
6400440..6406679
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AA seq
2079 aa
AA seq
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MNCPEIAQKVRKSAMRSNEKIGREMTGTACLLFFASVLFVSNGWGQCGNIEIKDTSVSYK
SITGIGNLVGFSGYRQTGNTQDNSDPTAPWNAGPIWKWKQRNFSGALWTDRHQFGDCNEA
CAYAQLPGGDFGRFTGTAEIGPDGFISYAKQFAPLYEVPCDTPWVDTTHEIFTNHANHSK
CTLTETLITRSLVLDDTSCADGWTYRSELGGLYQTLSHPDTIAAALKRSTQPKVEGKFHR
TYISAVDTTTPEVTEPIAISGRGVTITLNGICPGKYRVEAVLRTGQWDGFEAGGEAKYKS
TPAPYDKRQTVATVEIKDNGEGTFETPTGKIEEVTEVLENTIVLYPAVNGKTIGTPDGCR
VNSVDFGMHLGSVTGGLSAGLLRIKEDDLTPASFTPAALNLLSFSDDDVEVVRDTLENLR
QILVPEGLADIVTLSTTSYEIRVYLASQVGSLDTGTGFYAVSGTPLVTYTIAEASGSTAL
NPKLSLTETRGSKAIETVFSQNGDNWEATYGNGLKTERLTYTTEGDLKVETRELVNLDNS
VAQVTVKKTRTYSFGEKTIEEITGSGAAAVTTTYRYYDNATTDGLALGEMKTRQTSAGNW
ESWTYDTEGRKAKRVSQFLDSTFESADNLNRVTTWTYATVTDLDGDGKDEALETQTDTLL
GQETGRRHRLVLTATGGLGPNGETAEAWTEEREIVCTVPGAAWDASTNLVTITRTGVNGL
LQYKTVWTQRPDGTATSLLLDPQETGGRIWTTLEGALQLDGSITGRRTEVIEDELGRERE
RNVYENGLLVAAAVVMNRDELGRPTLTAFLDGTEERREYSSCCGLASFRSRDGILTTYEH
DDLGRVTRETVGGVSTVYEYDAAGRVISTTRVGSDDSQIPVSTQTYDTAGRLLTSTDALN
RTTTYTETLLSGSLTERKTVHADTSEEISTFYPDGSPASVRGDAAQWHNYAYGVDTDGEY
EQEYFPTGDEPTGTPAAQWVKRYRDHAGRNHLVRYPDNAEETSGYNAKGQLVRQTDADGV
QTLFAYNDRGEQTVTALDLDRNGTIDYAGDDRITRTVTTYATRDSVTVRRTTTEVWEDAG
DNPVTVSVTETAVDSLQSWTTTRGLTTHTSVTQDGAGNRTETTTAPDGSTSILTYAHGRL
TGETRKDANNNTLSQVAYAYDPHGRLVTQTATGIGTTTYSYFDDDQVATVTTPDPGDGTQ
TTSYTYNNRGWPSKVTHPDAAETETTYYPTGQIKRTWGARTYPQEYTYDAQGRLKTLTTW
KDFSGTTGEAVTTWNYDPQRGWLTQKLYADNQGPAYTYTPAGRLATRTWARGVVTTYGYT
DAGDLASVTYSDSTPAVAHTYDRAGRLHTTTDAAGLLTRSYANGQLTGEVYSGTGLLAGK
SVTHTFDSLQRQDSLSATSIQPVSYTYDAASRLATVTQGDLSASYSYHPNLGTVTGVTVS
NSSTERARQERTFDVLGRITRVDTLGNGSILHARRDYTYNAANQRTQVTHEDSRHWTYGY
DTLGQVTSAQKRLSDNTALPGYDFGYSFDDIGNRMSTTTNGRTAAYLSDALNRYTQRDYP
GAIDVRGSASTAVTVLVNDGLTTRTGEDFFRAAPFDNDPDPVNAEIKIQAVDPGPPEQVA
TETRSFATTGRTDPYIVPSDPEAFTHDADGNLTQDGRWNYTWDAENRLISMEMRYESSIG
LHLVQTRLEFAYDSQSRRLTAIMKILSPSAGWMVVDSKQLLYDGWNLLAEYDQLNAGQLL
RSHVWGLDLSGSSQGAGGVGGLLWSNTSTAAYVPGYDANGNIIAWINTTDGSLAGLREYG
AFGESVMSTGISEELPFGFSTKYQDRLTGLHYYGYRYYSTILARWLGNDPLEERGGINLY
AMVGNDLVNQWDYLGLEPLTEVPPEGKFVLRIAKNIKFNDDQAKRALVPYDSSQGGYYGD
GFEVEYQPADTCPCIRETIRLVQAIKIGSGDSRIDASDYTNINNANANGSAPLPGYTQDG
GRQGAHGSTSYFDAPYNAWSNFWGNKQGKMYQFEVCALCPDGTILGCFSFNFHNNERIPR
PTGTTPASSPGKLWRSAVERWEKASAPKNRSSIKYLQSI
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtcccgaaattgcgcagaaagttcgaaaatcggcaatgcgttccaacgaaaaa
attggccgagagatgaccggtaccgcctgcttactattcttcgcctcagttctgtttgtc
tccaatggatggggacaatgtggcaacatcgaaataaaagataccagtgtttcctataaa
agcatcacgggaatcggtaatctggtcggtttttccggctatcgccagactggcaatacc
caagataactccgacccgaccgccccttggaacgcaggcccaatctggaaatggaagcaa
cgtaattttagcggagccctctggacggacaggcaccagtttggcgactgcaacgaggct
tgtgcttatgcgcagttgccaggcggagacttcggaaggtttacgggcacggcagagatc
ggaccagatggatttatatcttatgctaagcaatttgcacctttatacgaggttccttgc
gacaccccttgggttgatactacacatgagattttcacaaaccatgcgaaccactcaaaa
tgcaccctgaccgaaacactgataacccggtctcttgttcttgatgataccagttgcgca
gatggctggacctaccggtctgaacttggtggcctgtatcagactctttcccacccggac
accatcgccgcggcgctgaagaggtccactcagcccaaagttgagggtaagtttcatcga
acctacatctcagctgttgatacgacaacgccagaagtgacagagccgatagcaatcagc
ggtcgtggagtgacaattacattgaatgggatctgtcccggaaagtatcgagttgaagct
gtcttgcgaaccggacaatgggacggctttgaagctggcggggaagcgaaatacaagagc
accccagcgccttatgacaaaaggcagacggtcgccacagtagagatcaaggataatggc
gaaggcacctttgaaacgccgactggcaaaatcgaagaagtcacagaggttcttgaaaat
accatcgtactctacccggctgtaaacggcaaaacaatcggaactccagacggatgtcgc
gtcaacagcgtcgatttcggcatgcatctgggatctgtcaccggagggctttctgccggc
ctgctgcgtatcaaggaagatgatctgacgccggcatcattcactccagcagcactgaac
ctgctctccttttccgatgatgatgtggaggtcgtccgtgatactttggagaatctgcgc
cagatccttgtccccgaaggactggcggacattgtcacgctttcgacaacttcttatgaa
atccgcgtgtacttggcctcccaagtcggaagtctggataccggaaccggcttctatgcg
gtcagcggcacgcctttggtcacctatacgattgcggaagcctccggctccacggcgttg
aatccgaagctgagcctgaccgaaacgcgcggcagcaaggccatcgaaacagtcttcagc
cagaacggcgataactgggaggcaacgtatggcaacggcctgaagaccgaacggctcact
tataccaccgagggagacctcaaggtggagacgcgcgaactggtcaacctcgacaacagc
gtggcgcaggtcaccgtaaaaaagacccgcacgtactccttcggcgaaaagaccatcgag
gaaatcaccggctcgggcgccgccgcggtcaccacgacctacaggtattacgacaatgcc
acgaccgacgggctggcgctgggcgagatgaagacccggcagacctccgccggcaactgg
gaaagctggacatacgacaccgagggccggaaggccaagcgcgtcagtcagttcctcgac
agcaccttcgagtcggccgacaacctcaaccgcgtgacgacctggacctacgccaccgtc
accgacctggacggcgacggcaaggatgaggcgctggaaacgcaaaccgacaccctgctc
gggcaggaaaccggccgccgccaccgactcgtactgacggccaccggcggcctcggcccg
aacggggaaaccgccgaggcctggaccgaggaacgcgagatcgtctgcaccgtgcccggc
gcggcctgggatgcctccaccaacctcgtcacgatcacccgcaccggcgtcaatggcctg
ctccagtacaagactgtctggacgcaacgacccgacggcacggccaccagcctgctgctc
gatccgcaggaaaccggcgggcgcatctggaccaccttggagggagcactccagcttgac
ggctcgatcaccggccgccgcaccgaagtcatcgaggacgaactgggccgcgaacgggag
cgcaacgtctatgaaaacggcctgctcgtggcggcggcggtggtcatgaaccgcgacgaa
ctcggccgacccacgctgactgctttcctcgacggcaccgaggaacgccgggagtattcg
tcgtgctgcgggctggcctccttccgcagccgcgacggcatcctgaccacgtacgagcat
gacgacctcggccgcgtcacccgcgagaccgtcggcggcgtctccaccgtttatgaatac
gacgcggccggccgggtcatctcgaccacccgcgtcggcagtgacgattcgcagattccc
gtctcgacccagacatacgacaccgccggccggttgctgacctccaccgatgcgctcaac
cgcaccaccacgtacaccgaaacgctgctttccggcagcctgaccgaacgcaaaaccgtc
cacgccgacaccagcgaggagatttccaccttctatccggacggctcgcccgcctcggtc
cgcggcgacgccgcgcagtggcacaattacgcttacggcgtggataccgacggcgaatac
gaacaggagtattttcccaccggtgacgaaccgaccggcacacccgccgcgcagtgggtc
aaacgctaccgcgaccacgccggtcgcaaccatctggtccgctatcccgacaacgccgag
gaaacctccggctacaacgccaagggccagcttgtccggcagaccgatgccgacggtgta
caaaccctgtttgcgtacaacgaccgcggcgagcagacggtgaccgccctcgacttggac
cgcaacggcaccatcgactacgctggcgacgaccgcatcactcgcacggtcaccacgtac
gcgacccgcgacagcgtcaccgtccgacgcacgaccaccgaagtctgggaagacgccgga
gacaatccggtgaccgtctcggtcaccgagacggcggtggacagcctgcaatcatggacc
accacccgcggcctgaccacgcacacgagcgtcacgcaggacggcgcgggcaaccgcacc
gaaacgacgacggctcccgacggctccaccagcatcctcacgtatgcccacggccgcctg
accggagaaacccgcaaggatgccaataacaacaccctttcccaagtcgcttacgcgtac
gatccgcacggccggctcgtcacgcaaacggcgaccggcatcggcacgactacgtattca
tattttgacgacgaccaagttgctactgtgaccacgcccgatcccggcgacggcacacag
accaccagctacacgtacaacaaccgcggttggccgtcgaaggtcacccatcccgacgcc
gccgagaccgaaaccacgtactacccgaccggccagataaagcgcacgtggggcgcacgc
acgtatccgcaagaatacacgtacgacgcgcagggccggctgaaaacgctgaccacctgg
aaagatttttccggcaccaccggcgaggccgtcaccacgtggaactacgacccgcaacgc
ggctggctcacccagaaactctacgcggacaatcagggaccggcctacacctacaccccc
gccgggcgcttggccacgcgcacctgggcgcgcggcgtcgttaccacatacggttacacc
gatgccggcgacttggcctccgtcacctacagcgacagcacgccggcggttgcccacacg
tatgaccgcgccgggcgcctgcacaccaccaccgacgccgccggcctgctcacccgctcc
tatgccaacggacagctgaccggcgaagtctattccggcaccggtctgcttgccggcaag
tcggtcacccacaccttcgacagcctgcaacggcaggactccctttcggcaacttcgatc
caacccgtgagctacacttacgacgccgcctcgcgtctggccaccgtgacgcagggcgac
ctatcggccagctacagctatcatccgaacctcggcacggtaaccggcgtcaccgtcagc
aacagttccaccgaacgtgcacggcaggaacgcaccttcgacgtgctcggtcgcatcacc
cgtgtagacacgctgggcaacggttccatcctgcacgcccgtcgcgactacacgtacaac
gccgctaaccagcgcacgcaggtaactcatgaagactcccgccactggacctacgggtac
gacaccctcgggcaggtgacctcggcgcaaaagcgcctgtccgacaacacggccttgccg
gggtacgatttcgggtacagttttgacgacatcggcaaccgcatgagcacgaccaccaac
ggccgcaccgccgcctacctttccgacgcgctcaaccgctacacgcagcgcgactacccc
ggtgccatcgacgtgcgcggctccgcctccaccgccgtcaccgtgctcgtcaacgacggc
ctgaccacccgtaccggcgaggactttttccgggctgctcccttcgacaacgatcccgat
ccggtcaacgcggaaataaagattcaggcggtcgatcccggcccgccggaacaggtcgct
accgaaacacgctcatttgccaccaccggccgcaccgatccctacattgtgccgagcgat
ccggaagcctttacccatgacgccgacggcaacctgacgcaagacggtcgctggaactac
acttgggatgcagaaaaccggctcattagcatggaaatgcgatatgaatcttcaatcgga
ctccatctcgtccagactcgactggaatttgcctatgattcacagagccgcaggcttacc
gctataatgaagattctgtcaccatctgctggctggatggtggtcgacagcaagcaactc
ctttacgatggctggaacctgctggccgagtacgaccagttgaatgcgggccaacttctg
cgcagccatgtctggggtctggatctgagcggcagctcgcaaggggccggcggcgtcggc
ggcctgctgtggagcaacacgagcacggcggcatacgttcccggctacgatgccaatggc
aacatcatcgcatggattaacacgaccgacggctccctcgccggcctgcgcgaatatggt
gcttttggcgaatccgtcatgagcaccggcattagtgaggaactgccgttcggattctcc
acaaaataccaagaccggctaaccggacttcactattacggctacagatattattcgaca
atcttggcccgctggctcggcaatgacccgcttgaagagcgcggggggataaatctgtat
gcgatggttggaaatgatttggtaaaccaatgggattatttaggcctagagccattaaca
gaggtgccgcctgaaggaaaatttgttttgcggattgcaaaaaatataaaattcaatgat
gatcaagcaaagcgtgcgctggtaccgtatgactccagtcaaggtgggtactatggagac
gggtttgaagttgaataccagcctgcagatacctgcccgtgtattcgagaaaccatacga
ttagtccaagccataaaaatcgggagtggcgactcacgaatcgatgcatcagactacacc
aatataaacaacgcaaacgcaaatggcagcgcgcccttgccgggctatacgcaggatggc
ggacggcaaggggcacacggttccacatcttactttgatgctccatataatgcatggagc
aatttctgggggaacaagcaggggaaaatgtatcaattcgaagtttgcgcgctatgtcct
gatggtactattttgggatgtttcagttttaattttcacaataatgagcgcatcccccgt
ccaacaggcacaacacccgcatcatccccaggcaagctatggagatcagccgttgaacga
tgggaaaaggcttctgccccaaaaaacagatcctctatcaaatacctgcaaagcatataa
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