Opitutaceae bacterium TAV5: OPIT5_28750
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Entry
OPIT5_28750 CDS
T03683
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
obt
Opitutaceae bacterium TAV5
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OPIT5_28750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obt03019
]
OPIT5_28750
03009 Ribosome biogenesis [BR:
obt03009
]
OPIT5_28750
03036 Chromosome and associated proteins [BR:
obt03036
]
OPIT5_28750
Enzymes [BR:
obt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
OPIT5_28750
Messenger RNA biogenesis [BR:
obt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OPIT5_28750
Ribosome biogenesis [BR:
obt03009
]
Eukaryotic type
90S particles
RNase
OPIT5_28750
Prokaryotic type
rRNA processing factors
OPIT5_28750
Chromosome and associated proteins [BR:
obt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
OPIT5_28750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DSRM_CARF
Motif
Other DBs
NCBI-ProteinID:
AHF93588
LinkDB
All DBs
Position
6832092..6832841
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AA seq
249 aa
AA seq
DB search
MPADAGAVLADLQARLGHTFRDPVLLLTALTHPSWLQEHPETPENNQRLELLGDAVLQLL
LTEKLFHLFPAEREGPLSKHRAVLSRGSFLAQLARETGLDAALRLGSSEEQTGGRQRDST
LEDAFEALFGALWLDAGLEPARRVLHAIYGPLEARLSSNAGADNPKGRLQERVQPEYGNN
ALRYETFHISGQDHAREYESRVYLCERFLATGRGTSKKHAEEAAAGAALALLARAEAEEN
QAGSGPETP
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgacgccggggcggttcttgcggatctgcaggcccggctcggccacaccttc
cgcgaccccgtcctgttgctcaccgccctcacgcatccctcctggttgcaggaacacccg
gaaacgcccgaaaacaaccagcgcctcgaactcctcggcgacgccgttctccagctcctc
ctcaccgaaaaactcttccacctcttccccgccgaacgcgaaggcccgctcagcaaacac
cgcgccgtcctttcgcggggttcctttctggcgcaactcgcccgcgaaaccggtctcgac
gccgccctgcgtctcggctccagcgaggaacagacaggcgggcgccagcgcgattccacg
ctcgaagacgccttcgaagcgctcttcggcgccctctggctcgatgcgggccttgaaccg
gctcgccgtgtgctccacgcgatctacggcccgctggaggcgcgtctttccagcaatgcc
ggagccgacaaccccaaaggccggctccaggaacgcgtgcagcccgagtacggcaacaac
gccttgcgctacgagacgtttcacatttccggccaggaccacgcccgtgaatacgagtcg
cgcgtttacctctgcgagcgtttcctcgccaccggtcgcggcacctcgaaaaaacatgcc
gaggaagccgccgccggcgcagccctcgccctcctcgcccgcgccgaagccgaagaaaac
caggccggcagcggtccggaaaccccgtaa
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