Opitutaceae bacterium TAV5: OPIT5_29520
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Entry
OPIT5_29520 CDS
T03683
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
obt
Opitutaceae bacterium TAV5
Pathway
obt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OPIT5_29520 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obt03019
]
OPIT5_29520 (groEL)
03110 Chaperones and folding catalysts [BR:
obt03110
]
OPIT5_29520 (groEL)
03029 Mitochondrial biogenesis [BR:
obt03029
]
OPIT5_29520 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obt04147
]
OPIT5_29520 (groEL)
Enzymes [BR:
obt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OPIT5_29520 (groEL)
Messenger RNA biogenesis [BR:
obt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OPIT5_29520 (groEL)
Chaperones and folding catalysts [BR:
obt03110
]
Heat shock proteins
HSP60 / Chaperonin
OPIT5_29520 (groEL)
Mitochondrial biogenesis [BR:
obt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OPIT5_29520 (groEL)
Exosome [BR:
obt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OPIT5_29520 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
OPIT5_29520 (groEL)
Exosomal proteins of breast cancer cells
OPIT5_29520 (groEL)
Exosomal proteins of colorectal cancer cells
OPIT5_29520 (groEL)
Exosomal proteins of bladder cancer cells
OPIT5_29520 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Proteasome
Motif
Other DBs
NCBI-ProteinID:
AHF93706
LinkDB
All DBs
Position
complement(6988338..6989918)
Genome browser
AA seq
526 aa
AA seq
DB search
MAAKQLLFDEAARQKILRGIELLARAVKVTLGPKGRNVVIDKKFGSPAVTKDGVTVANEI
ELPDPYENMGAQMVKEVASKTSDAAGDGTTTATVLAESIYKEGLRSVTAGCNPIFLKRGI
DKAVEAAVLELARVSRKVSTGDEIRQVATVSANWDDSIGRILADAMDKVGKDGTITLEEG
KSVETTLEVVEGMQFDKGYLSPYFTTGEDRLEAVLEDAYVLVHEKKIGSVQDLLPLLQVI
AQGKRPLLIIAEDIEGEALTTLVLNKIRGILNVCAVKAPGFGDRRKAMMEDIATLAGGRC
FSEDLGMKLENISLSELGSAKRITVDKESTIIIGGAGTPADVQTRIRQIRREIAETTSDY
DREKLQERLAKLAGGIAVIKVGASTELEMQEKKSRLDDALHATRAAVAEGIVAGGGVALL
RCGPVVDALKLEGDEAIGAQIVRRAIESPIRALCANAGIEGAVVIDRVEAGKGNHGFNVA
TGEYEDLVKAGVVDPAKVTRTALQNAASIAGLLLTTECLITEIPAS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaacaactccttttcgacgaggcagcccgtcagaaaattctccgcggcatc
gagctcctcgcccgcgccgtaaaagtcacgctcggccccaaaggccgcaacgtcgtcatc
gacaaaaaattcggttcgcccgcggtgaccaaggacggcgtcaccgtcgccaacgaaatc
gagctgcccgatccttacgaaaacatgggcgcgcagatggtgaaggaagtggcgtccaaa
acctccgatgccgcgggcgacggcaccaccaccgccaccgtgctggccgagtccatctac
aaggaagggctgcgcagcgtcaccgccggctgcaaccccatcttcctcaaacgcggcatc
gacaaggccgtggaggccgcggtcctcgaactcgcgcgcgtgtcgcggaaagtgtccacc
ggcgacgaaatccggcaggtggcgaccgtctcggcgaactgggacgattccatcggccgc
atcctcgccgacgcgatggacaaggtgggcaaggacgggacgatcacgctggaggaaggc
aaatccgtcgagaccacgctcgaggtggtcgagggcatgcagttcgacaagggttacctc
tcgccctacttcaccaccggcgaggaccgcctcgaggcggtcctggaagacgcttacgtg
ctcgttcacgaaaagaaaatcggcagcgtgcaggatctcctgcccctgcttcaggtgatc
gcccaggggaaacgtccgctgctgatcatcgcggaggacatcgaaggcgaggcgctcacg
acgctcgtcctgaacaagattcgcggcatcctgaatgtctgcgcggtcaaggctcccggt
ttcggggatcgccgcaaggccatgatggaagacatcgcgacgcttgccggcggacgctgc
ttcagcgaggacctcggcatgaagctggagaacatttccctcagcgaactgggcagcgcc
aaacgcatcaccgtggacaaggaaagcacgatcatcatcggcggcgccgggacgccggcg
gacgtccagacgcgcatcaggcaaatccggcgcgagatcgcggaaaccacttcggactac
gatcgggaaaagctccaggagcgcctggccaagctcgcgggcggcatcgcggtgatcaag
gtcggcgcctcgaccgagctcgaaatgcaggagaaaaagtcgcgtctcgacgatgcgctg
cacgccacccgggccgccgtggcggaaggcattgtcgccggcggcggcgtcgccctgttg
cgctgcggcccggtcgtcgacgcgctgaagctcgaaggcgacgaagccatcggcgcgcag
atcgtgcgccgcgccatcgagtctcccatccgcgccctttgcgccaatgccgggatcgag
ggcgcagtcgtcatcgaccgggtggaggcggggaagggcaaccacggcttcaacgtcgcc
acgggcgaatacgaggacctggtcaaggcgggagtcgtcgatccggccaaggtgacgcgc
accgcgctgcaaaacgccgcctcgatcgccggcctgctcctcacgaccgagtgcctgatc
accgaaatccccgcgagctga
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