Afipia carboxidovorans OM5 (Mississippi): OCAR_4061
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Entry
OCAR_4061 CDS
T00783
Name
(GenBank) helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
oca03029
]
OCAR_4061
Enzymes [BR:
oca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OCAR_4061
Mitochondrial biogenesis [BR:
oca03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
OCAR_4061
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEXQc_Suv3
Helicase_C
DEAD
DUF5131
Dynein_C
Motif
Other DBs
NCBI-ProteinID:
ACI91212
LinkDB
All DBs
Position
complement(59528..62776)
Genome browser
AA seq
1082 aa
AA seq
DB search
MLGPTNTGKTHLAIERMLAHSSGLIGLPLRLLAREVYNKIVARAGAEQVALITGEEKIKP
PNARYWVSTVEAMPRELDVSFLAVDEIQIAADLERGHVFTDRILNRRGRDETLLLGAATM
RPLIERLLPGANIVTRPRLSLLEFAGDRKITRQPRRTAIVAFSADEVYAIAELIRRQHGG
AAVVLGSLSPRTRNAQVEMFQSGDVDYLVATDAIGMGLNLDVDHVAFASDYKYDGYQFRR
LTPAEFAQIAGRAGRATRNGTFGTTGRCAPFEPELVNALQNHLFDSVKMLQWRNTALDFS
SLAALQVSLALAPEHQALTRAPLGEDQRVLEHAARDPDVRDMATDSASVERLWETCLVPD
YRKLSPAAHAELVTTLFSFLMRKGRIPDQWFAAQVAQADRVDGGIDTLSARISQIRTWTF
AANRPDWLSDPLHWQETTRAVEDKLSDALHSRLTERFVDRRTSVLMRRLRENMMLTTEIG
KTGEVTVEGHVIGRLDGFMFAPDAAEAGSEAKALQATALKALAGEIDARAEKLSAAADDQ
FALASDGTLRWTGDAVGKLVAADEVLHPRIRIIADERLTGASRDAVQARLDLWLKTHIEK
ILGPMFELSKAEDVTGIARGIAFQLVEALGVLERPKIAAEMKDLDQPSRAVLRKYGVRFG
AYHIFFPALLKPGARTLASLLWALKEDNVDMNALGGAQHLAASGRTSFPADKTLSNDAYR
VLGYRLAGERVVRVDILERLADLIRPALAWRPGTGMEKPAGAFDGRSFTVTQAMTSLTGS
AGEDFASVLRSLGYRMDRRAPLPEEPKPEASTEVASTETTSAEAASESTPPVEASTEAAA
GESATASESAASDEAAVAADAHVESVEASSAAKLPDVEFAPTEAPAQEAASSVEPAPSAE
SSSPDEAASTDAPSAEAASANTATETADAVAAPAEPELVEVWRPAGRHDERRGRHERHRR
HHRHGSAASAAAADAAAEGGEKKERPARRHDRSREDRRQRPEGEGAQARGPKDERNEAGR
ERAKGRRGKFEGKRDGRDRKDGGPAFRTFATSAPRERERTADPNSPFAKLAALKEQLGTR
KD
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
gtgctcggcccgacgaacaccggcaagacgcatcttgcgatcgagcggatgcttgcgcat
tcctccggcctgattggcttgccgctgcggcttctggcgcgcgaggtctacaacaagatc
gtcgcccgcgcgggcgcggagcaggtcgcgctgatcaccggtgaggagaagatcaagcca
ccgaatgcgcgctactgggtgtcgaccgtcgaggcgatgccgcgcgaactcgacgtgtcg
tttctcgccgtcgatgaaatccagatcgccgccgatcttgagcggggtcacgtcttcacc
gaccgcattctcaaccggcgcggccgcgatgagacgctgctgctcggcgccgcgacgatg
cggcctttgatcgagcggcttctgcccggcgccaatatcgtgacgcggccgcgtctgtcg
ctgttggaatttgcgggcgaccgcaagatcacgcgccagccgcgccgcacggcgatcgtc
gccttctctgccgatgaggtttacgcaatcgccgaattgatccgccgccagcacggcggt
gcggctgtggtgctgggctcgttgtcgccgcgcacgcgcaatgcgcaggtggagatgttc
cagtccggcgatgtcgattatctcgtcgcgaccgacgccatcggaatgggcctcaacctt
gatgtcgatcatgtcgccttcgcatccgactataaatatgacggttatcaattccgtcgc
ctgacgcctgcagaattcgcgcagattgcaggccgcgccggccgtgccacgcgcaacggc
acgttcggtaccacgggacgctgcgcgccgttcgagcccgaactcgtcaacgcactgcag
aaccacctgttcgacagcgtgaagatgctgcaatggcgcaatacggcgctcgacttttcc
tcgctcgcggcgctgcaggtgtcgcttgcgctcgcgccggagcatcaggcgctgacgcgc
gcgccgcttggtgaggatcagcgcgtgctggaacacgccgcgcgcgacccagatgtgcgc
gatatggcgacggattccgcctcggtcgaacggctctgggaaacctgcctggttcccgat
taccgcaagctgtcaccggcggcacatgctgagctggttacaacgctattctcgttcctg
atgcgaaagggccggattccggatcaatggtttgcggcgcaggtggcgcaggcggatcgg
gtggatggcggtatcgacaccctgtccgcgcggatttcacagatccggacctggaccttt
gccgcaaaccggccggactggctgtccgacccactccattggcaggaaacgacccgtgcg
gtggaagataaattgtcggatgcattgcattcgaggctaacggagcgtttcgttgatcgc
cggaccagtgtattgatgcgccgcttgcgggaaaacatgatgctgacgactgaaattgga
aagaccggcgaagtcactgttgagggccatgtcatcggccgtctcgacggatttatgttc
gcccccgatgccgctgaggcaggctcggaagcgaaggcgctgcaggcgactgcactgaag
gcgctggccggggaaatcgacgcgcgcgcggagaagctctctgctgccgccgacgatcag
ttcgcgcttgcctccgacggcacgctgcgctggaccggcgatgcggtcggcaagcttgtc
gccgccgacgaggtgctgcatccgcgcatccgcattatcgccgatgagcgcctcaccggt
gcttcgcgtgacgccgtgcaggcgcggctcgatctctggctcaagacgcatatcgaaaaa
attctcgggccgatgttcgagctctccaaggccgaggacgtcaccggcattgcgcgcggc
attgccttccagctcgtcgaggcgctcggcgttctggagcggccaaagattgcggccgag
atgaaggatctcgatcagccctcacgcgccgtcttgcgtaaatacggcgtgcgcttcggc
gcctatcacatcttcttcccggcgctgctcaagcccggcgcgcgcacgctcgcctcgctg
ttgtgggcgctgaaagaggacaatgtcgatatgaacgcgctcggcggcgcgcagcatctc
gcagcgagcggccgcacctcgttcccagccgacaagacattgtcgaacgatgcctatcgc
gtgctgggttacaggctcgcgggcgagcgcgtggtgcgcgtcgatattctcgagcgtctc
gccgatctcattcgtcccgctttggcgtggcggcccggcaccggcatggagaagcctgca
ggtgcgttcgacggccgttcgttcaccgtgacgcaggcgatgacctcgctcaccggttcg
gcgggtgaggacttcgcctcggtgttgcgttcgctcggttatcgtatggatcgccgtgcg
ccgctgccggaagaaccgaagccggaagcatctaccgaagttgcttccactgagacgact
tctgcggaggctgcatccgagagcacgccacctgttgaagcttcgaccgaagccgccgca
ggcgagtccgctaccgcaagtgaatctgctgcatctgatgaggctgcggtggctgcggat
gctcacgttgaaagcgttgaggcttccagcgcagcgaagttgcctgacgttgagttcgca
ccgactgaggctcctgcgcaggaggcggcttccagtgttgagcccgcgccttccgccgaa
tcttcttccccagacgaggctgcttccaccgacgctccttccgctgaagctgcatcggca
aacaccgcgacggaaacggcagacgctgttgccgcgcctgcggagcccgagcttgtcgag
gtgtggcgtcctgcgggccgccacgatgaacgtcgcggacggcatgagcgccatcgccgg
catcaccgccatgggtcggcagcgtctgctgctgcagcggatgcagcggctgaaggcggc
gagaaaaaggaacgccccgcgcggcggcacgatcgttcccgcgaggatcgccgccagcgg
ccggagggagagggtgcgcaggcgcgcggcccgaaggacgagcgtaacgaggcaggacgc
gagcgcgcgaagggccgccggggcaagttcgaaggcaagcgtgacggccgcgaccgcaag
gatggtggtcccgcgttccgcaccttcgcaaccagcgccccgcgggaacgcgaacgcact
gccgatccgaattcgccgttcgcaaaattggccgcgctcaaggaacagctcggcacccgt
aaagattga
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