Afipia carboxidovorans OM5 (Mississippi): OCAR_4120
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Entry
OCAR_4120 CDS
T00783
Name
(GenBank) transcriptional regulator, Fur family
KO
K09823
Fur family transcriptional regulator, zinc uptake regulator
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCAR_4120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oca03000
]
OCAR_4120
Transcription factors [BR:
oca03000
]
Prokaryotic type
Helix-turn-helix
Fur family
OCAR_4120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FUR
TrmB
PadR
AhtL-like_1st
WHD_F93
Motif
Other DBs
NCBI-ProteinID:
ACI91271
UniProt:
B6JA28
LinkDB
All DBs
Position
complement(119442..119930)
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AA seq
162 aa
AA seq
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MSLKSAFPAPDHDHDHCASTAMAHAEQHCAARGQKFTPIRRQVLQALLASHKPLGAYEII
DELARLMPRPAPITIYRALEFLMDNGLVHRIESRNAFLACVHNHEASPVVALLICERCGA
VGEIPAAPIVKGVAEVVEGTGFSPKLSVVEITGLCGHCQPRA
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcaagtctgcctttccggcccccgatcacgatcacgaccactgcgcctcgacc
gcgatggcccatgccgagcagcactgcgctgcgcgggggcagaagttcaccccgatccgc
cggcaggtgctgcaggcgctgctcgcgagccataaaccgctcggcgcctatgagattatc
gacgaattggcccgcctgatgccccgtccggcgccgatcaccatctaccgggcgctggaa
ttcctgatggacaatgggcttgtccatcgcatcgagagccgtaatgccttcctcgcttgc
gtccataaccatgaggcatctcccgtggtggcgctcctgatctgcgagcgatgcggggcg
gtgggcgagattccggcggcgccgatcgtcaagggtgtcgccgaggtagtcgagggaacc
ggattttcaccaaaactctcagtggtggagatcaccggtttgtgcggccattgccagccg
cgtgcctga
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