Afipia carboxidovorans OM5 (Mississippi): OCAR_4145
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Entry
OCAR_4145 CDS
T00783
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00270
Cysteine and methionine metabolism
oca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
OCAR_4145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oca03000
]
OCAR_4145
03032 DNA replication proteins [BR:
oca03032
]
OCAR_4145
03036 Chromosome and associated proteins [BR:
oca03036
]
OCAR_4145
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
oca02048
]
OCAR_4145
Enzymes [BR:
oca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
OCAR_4145
Transcription factors [BR:
oca03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
OCAR_4145
DNA replication proteins [BR:
oca03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
OCAR_4145
Chromosome and associated proteins [BR:
oca03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
OCAR_4145
Prokaryotic defense system [BR:
oca02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
OCAR_4145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
ACI91295
LinkDB
All DBs
Position
complement(146952..148640)
Genome browser
AA seq
562 aa
AA seq
DB search
MRKAAKRITAIDLYSGVGGWSLGLRLAGIDVIASYELSEFANKTNDLNNSHPTSTVDIRK
IDLKSLPKNVDVVVGSPPCTQFSYANRGGKGDIEDGLKDIVCFLKIVDYVKPKVWAMENV
PRVAQIIEAELRPGGRLRRFHHLGIKARVVNMEEFGLPQRRLRCIAGNFDFDLLHAFSAN
ATKRTLGEIVEALANDSVIDPIYKIQLSKASLTDHVIEDCLNDEETRINRANKTAHPVYN
QMPFPDSLNRSVRTITATCTRVSRESIVIPDSVTPDAVRRLTVRERACLQGFPITYQFCG
RTHAQKLKLVGNALPPLFSFYVGHTIKRTSVRRIPSIAARAKLLLKKPVEAPSARPEKPG
SKYPSSRTFRFAVPSLRLKSGVRFELVNAHSVRGTNWLINFYFGSSKSIHDLRLGQGFER
DVIKNLPSSVGKDVKAVCLRVSKFLATADLQNMQKVWSHKARGKTHPFELLDCVDAAGAE
LSEILTSHAGICSMLVNKAILERYGRRVRKVVGIGKLERNSSRIVAGLTIGSIVNEFIGN
QYYKPRATSELNEQVIAVSFTT
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaagcggctaagaggattacggcaattgacctttattccggggttggcggatgg
tctcttgggcttaggttggcggggatcgacgtcatcgcatcttacgagttgtcggagttt
gccaataaaacgaatgacctcaataattctcatccgacatcgaccgtagacattcggaag
atcgatcttaagagccttcccaaaaatgttgacgtcgtggttggtagtccgccctgtact
cagttctcgtatgcgaatcgtggtggcaagggtgatattgaagatggcttgaaagacatc
gtctgctttttaaagatcgttgattatgtgaagccgaaagtgtgggctatggaaaacgtt
ccgcgcgtagctcagataatcgaagcagagctgagacccggtgggcgtttgcgacgtttc
catcacctcggcatcaaagcgcgcgtcgttaacatggaagaatttggactcccgcaacgg
agattgcggtgtattgcagggaatttcgattttgatctgcttcacgcgttttccgctaac
gcaaccaagcgaactctgggagagattgttgaagcgctcgcgaatgatagtgtgatagat
ccaatatataaaattcaactttcaaaagcatcgctgaccgaccacgttatcgaagattgt
ctcaacgacgaagaaactcgaatcaatcgagcgaataagactgcgcatccagtctacaat
cagatgccattcccggattcgcttaatcgtagcgttagaacgattaccgctacctgcacc
cgtgtatcgcgggaaagtatcgtaatccctgattccgtgacgcctgatgcagtgcggcgt
cttacagtgagggagagggcttgccttcaaggattcccaataacctatcagttctgcggc
agaacccatgcgcagaagttaaaattggtgggtaatgcgcttccgccgctattttccttc
tatgttggtcatacgatcaagagaacgtctgttcgaaggattccatcaatagcggctaga
gcaaagctcttactcaaaaagccggtggaggctccgagtgctcgaccagaaaagcctgga
tcgaaatacccgtcgtcgagaacgtttcgctttgcagtaccaagtcttcggttgaaaagc
ggtgttagatttgagcttgtgaacgcgcacagtgttcgcggtacaaactggctcataaat
ttttatttcggaagctctaagtcgattcatgatctgaggttaggtcaaggcttcgagcgg
gatgtaatcaaaaatcttcctagttccgttggaaaggatgtaaaggcagtctgcttgcgt
gtctccaaatttttagcaacggctgatttgcaaaatatgcagaaggtatggagtcataag
gcgcgaggtaaaacccatccattcgagttgctcgactgtgttgatgctgcgggcgcggaa
ctctcggagattttgacaagccatgccggtatctgctcgatgctggtgaataaggctatt
ctagagcgttacgggagacgcgtacgtaaggttgtgggcatcggcaaacttgagcgtaac
tcttcacgtattgtggcaggtctgactattggctcgatcgtgaatgagtttatcggaaat
caatattataaacctcgcgcgacatctgagctgaatgagcaggtcatagcagtcagtttc
actacttag
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