Afipia carboxidovorans OM5 (Mississippi): OCAR_4226
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Entry
OCAR_4226 CDS
T00783
Name
(GenBank) dead/deah box helicase domain protein
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
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Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
iPGM_N
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ACI91375
UniProt:
B6JAA9
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Position
227491..231015
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AA seq
1174 aa
AA seq
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METPDELTAFLATATVDGILGRLLYRGAAWSLMREAGVLPQNAPPLGATIETDLAEHGFA
LLRGAMALRAQTGASDLTDKAFERAANAFEALVRNGDPEAPERGFRRTIAAAAYHLAGYS
AVAYSLFNELAEDLNAAPGETAIRHLILRDLDQLRGFVRDWLGNEAHSDEQMAETLGGDE
PDIDDVLSTILNTTICRALAFFDFALETGEDEPIDTARDLLATAVSLADNAENVPLWWIS
NLCRHLIDDLWQHALHQNLPTEPPAGTEERYPDLRRLFIGSLYARKTSEVELWPSQREAA
QRSTDVTDDLVVALPTSAGKTRVAEIAALMTLSSARRVLIVTPLRALSAQTERSFRKTFA
PLGFSVSSLYGASGLSVGDEDALRTREIIIATPEKLDFALRSDPSLIDDVGLIVLDEGHM
IGPSEREIRYETLVQRLLRRADAAERRIVCLSAILPSGDELNDLTAWIRSDEPGEPVRSD
WRPTRQRFGALTWRGKDALLRLDLDDDGPFLDKFVEEKPARGREKNPYPRKNSHLALFAA
WEFAGQGKRTLIFSTQANWVESYGKQVVDLCRRGYLDSLLEDEAPIARALEVGKEWLGED
HPAVASLKAGVAIHHGRLPSPFLRELEVLLSEGVLKVIVASPTLSQGLNLNAAVLLVPAL
YRAGEKIKGEEFANVAGRAGRAFVDVEGLIVHVMFDKTDWRKKEWRKLVASAKARTLKSG
LIQIVAEILERLSREGVLDRDDAWEYLANAREAWRSPTEEAEVAERLAAAGEYDSVPDAD
EDDETDEGDEEETIDEEPLSQLVERLDATVFGLIEALDADRADLPKLLDEALKGSLWARQ
IAHEEEEVAPLHKKVFEARAALIWKSTTPQARRGHFAMGVGLEAGLSIDTMADELAQLLD
RADDAALSGDVDELADALGGLGERLLFMRPFIPDKKNALPANWKVILRAWISGDAVEKIG
PQNMRAVEEAFTYRLVWALEAVRTRRMSLGWSPETVAGGAAAAVETGVPQFMMAMLIRAG
LPSRRAAIAAIQDAEPIFVTPAEMRAWLESDEITAYTDAGDWPTPDTAALWARFRTEALS
GGIQKWSVERYKRLLDIAAAPPAGLYRIVTDEGDGRTWLETPDYRRVAPFKKPAVDPKPS
LFSGRLPGNTRLVEALRVGRGKLRWPPADARGEN
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
ttggagacgcctgacgagctaacggcttttctcgcaaccgcgaccgtcgacggcattctc
ggccggctgctctatcgtggcgcggcctggtcgctgatgcgggaagccggcgtgttgccg
cagaacgcgccgccgttgggcgcgactattgaaaccgaccttgccgaacatggtttcgcg
ctgcttcggggcgccatggcgctgcgcgcccagaccggtgcatcggacctgacggacaag
gcgttcgagcgggccgccaacgcctttgaagccttggtgcgcaacggcgatcccgaggcg
ccggagcgcggctttcgccgcaccatagctgccgcagcctatcacctcgcgggttattcg
gctgtcgcctattcgctgttcaacgagctggccgaagatctcaacgccgcgcctggcgaa
acggcgatccgtcacctcatcctgcgcgatctcgatcagttgcgcggctttgttcgcgac
tggcttggcaatgaggcccacagcgatgagcagatggccgaaacgctgggcggcgacgag
cccgatatcgacgatgtgctgtcgaccatcctgaatacgacgatctgccgagccttggcc
tttttcgatttcgccctggagacgggcgaggatgagccgattgacactgcgcgggatctg
cttgccaccgccgtcagcctggccgacaatgccgagaacgtcccgctgtggtggatctcg
aatctctgccgccacctgatcgacgatctctggcagcacgcgctgcaccagaacctaccg
accgagccgcctgcgggaacggaggagcgataccccgacctccggcggctgttcatcggt
tcgctgtacgcgcgcaaaacctccgaagtggagctatggccttctcagcgcgaggccgcg
cagcggtcgaccgatgtcaccgacgacctggtcgtggcgctccccacgagcgcagggaag
acgcgcgttgcggaaatcgccgcattgatgaccctgtcttcggctcgccgggtgctgatc
gtcaccccgcttcgcgccttgtcggctcagaccgaacggtccttccgcaagaccttcgcc
ccgctcggattcagcgtttcctcgctgtatggcgccagcgggctatcggtgggcgacgag
gacgcgctgcgcacccgcgagatcattattgccacgccggaaaagctcgacttcgcgctg
cgaagtgatccgtcgctgatcgatgacgtcggcctgatcgttctcgatgaaggtcacatg
atcgggccaagcgagcgcgagattcgttacgagacactcgtgcaacgcctgctgcgacgc
gcggacgcggccgaacgccggatcgtctgtctttcggctatcctgccgagcggcgacgaa
ctcaacgatcttaccgcgtggattcgctctgatgaacccggcgagcccgtgcgctccgac
tggcgccccacgcgccagcgtttcggcgcactgacctggcgcggcaaggatgcgctgctt
cggctcgacctcgatgacgacggtccattcctcgacaagtttgtcgaggagaagcccgcg
cgcggccgggagaagaacccctatccgcgcaagaattcgcatctcgccctcttcgcggcc
tgggaattcgccggccagggcaagcgcaccctgatcttctcgacccaggccaactgggtc
gaaagctacggcaagcaggtcgttgacctctgcaggcgcggctatctcgattctttgctg
gaggatgaggcgccgatcgcgcgcgcgttggaggtcggcaaggaatggctgggtgaagac
catccggccgtcgccagcctgaaggccggcgtcgccatccatcatggccgcctgccgagt
ccgttcctgcgcgagctggaagtccttctgtccgagggcgtgctgaaagtcatcgtcgct
tcgccgacgctttcccaagggcttaatctcaacgctgcggtcctgctcgtacccgcgctc
taccgcgctggtgagaagatcaagggtgaggaattcgccaatgtcgcggggcgcgccggg
cgcgctttcgtcgacgtcgaaggcctgatcgtccatgtcatgttcgacaagaccgactgg
cgaaagaaggaatggaggaagctggtcgcctccgccaaggcccgaaccctaaagagcggc
cttatccagatcgtcgccgagatccttgagcgcctgtcgcgcgagggcgtgctcgaccgt
gacgatgcgtgggaatatctagcaaatgcccgggaggcctggagatcgccgaccgaagag
gccgaggtagccgaacgtctggccgccgctggcgagtacgactccgttcccgacgcggat
gaggatgacgaaaccgacgagggcgacgaagaggagaccatcgacgaagagccgttgtcg
cagctcgtcgagcgcctcgatgcgaccgtgttcggcctgatcgaagcgctggacgccgat
cgtgccgaccttccaaagttgctggacgaagctctcaaggggtcgctctgggcccggcaa
atcgcccacgaagaagaggaggtcgcgcccctgcacaagaaggtgttcgaggcccgcgcc
gcgctgatctggaagtcgaccacgccgcaggcgcggcgcggacatttcgcaatgggggtt
ggacttgaagccggcctttctatcgacaccatggctgatgaactggcccagctgctcgat
cgcgccgacgatgcggcgctgagcggcgacgtcgacgagctcgccgacgcccttggtggc
ctgggagaacggttgctgttcatgcggcccttcatccccgacaagaagaacgcgctgccg
gccaattggaaagtcatcctgcgcgcctggatctcaggcgacgcggtcgagaagatcgga
ccgcagaacatgcgggcggtcgaagaggctttcacctatcgcttggtctgggcgctggaa
gccgtccgcacccgccgcatgtcgctcggctggtcaccggagacggtggcgggcggcgca
gcggcggcggtcgaaaccggcgtcccgcagttcatgatggcgatgttgatccgggcgggg
cttccgtcccggcgcgcggccatcgcggccattcaggacgccgagccgatcttcgtgacg
cccgcggagatgcgggcctggctcgaatccgacgagattacggcctacactgatgccggc
gactggcccacgcccgacactgcagcgctttgggcgcgctttcgcaccgaagctctcagc
ggcggaatccagaaatggtcggtcgaacgctataagcgtctgctcgacatcgcggcggcc
ccgcccgcgggcctttatcgaatcgtcacggacgagggggacggacgaacttggctcgaa
acgcctgactaccggcgggtcgcgcccttcaagaagccggcggtggacccaaagcccagc
ctcttctcaggaaggctgccgggcaacaccaggctggtcgaagccttgcgcgttggtcgc
ggaaaactgcggtggccgcccgctgacgctagaggggaaaattag
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