Afipia carboxidovorans OM5 (Mississippi): OCAR_4289
Help
Entry
OCAR_4289 CDS
T00783
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00020
Citrate cycle (TCA cycle)
oca00190
Oxidative phosphorylation
oca00650
Butanoate metabolism
oca00720
Other carbon fixation pathways
oca01100
Metabolic pathways
oca01110
Biosynthesis of secondary metabolites
oca01120
Microbial metabolism in diverse environments
oca01200
Carbon metabolism
Module
oca_M00009
Citrate cycle (TCA cycle, Krebs cycle)
oca_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
oca_M00149
Succinate dehydrogenase, prokaryotes
oca_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OCAR_4289 (sdhA)
00650 Butanoate metabolism
OCAR_4289 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
OCAR_4289 (sdhA)
00720 Other carbon fixation pathways
OCAR_4289 (sdhA)
Enzymes [BR:
oca01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
OCAR_4289 (sdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
GIDA
HI0933_like
Thi4
Motif
Other DBs
NCBI-ProteinID:
ACI91438
UniProt:
B6JAS5
LinkDB
All DBs
Position
278927..280741
Genome browser
AA seq
604 aa
AA seq
DB search
MASNGKAAAGPAYPIEDHTYDVVVVGAGGAGLRAVVGCSEAGLRTACITKVFPTRSHTVA
AQGGISASLGNMHPDDWRWHMYDTVKGSDWLGDQDCIEYMVRNAPEAVYELEHWGVPFSR
TEDGKIFQRPFGGMTRDYGKGQAQRTCAAADRTGHAMLHTMYGQAVRHSAEFFIEFFAID
LIMDDQGVCRGAIALKLDDGTLHRFRAQTTILATGGYGRAYLSCTSAHTCTGDGGGMVLR
AGLPLQDMEFVQFHPTGIFPAGCLITEGARGEGGYLVNAEGERFMERYAPSAKDLASRDV
VSRAMTIEIREGRGVGKRKDHMFLHLDHLDPAVLHDRLPGISESARIFAGVDVTREPIPV
LPTVHYNMGGIPTNFHGEVVVKKRGDDDAVVPGLMAVGEAACVSVHGANRLGSNSLIDLV
VFGRSAALRCAEKLTPNGKQPELPADSAEKALARLDHFRYASGGTPTAKLRDSMQRVMQN
NCAVFRTGEVLHEGKDLIHKVHSGLTDISVTDRSLIWNTDLVETLEFDNLIIQAVVTMES
AVNRTESRGAHAREDFPERDDKNWMKHTLAWIDPKANTTIDYRPVHSYTMTNDIQYIPPK
ARVY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaacggcaaggctgcggcagggcccgcctatccgatcgaggaccacacctac
gatgtcgtcgtggtcggcgcgggcggtgcgggcttgcgcgccgtggtcggctgctcggaa
gcgggtttgcgcacggcctgcatcacaaaggtgtttccgacccgctcgcacactgtcgcg
gcgcagggcggcatctccgcttcgctcggcaacatgcatccggatgactggcgctggcac
atgtacgacaccgtgaaggggtcggactggctcggcgatcaggactgcatcgaatacatg
gtgcgcaacgcacccgaagccgtctacgaactcgagcattggggcgtgccgttctcccgc
accgaagacggcaagatcttccagcgcccgttcggcggcatgacccgcgactacggcaag
ggccaggcgcaacgcacctgcgccgctgccgaccgcaccggccacgccatgctgcatacg
atgtatggccaggcggtgcgccactcggcggagttcttcatcgagttcttcgccatcgat
ctcatcatggacgatcagggcgtctgccgcggcgcgatcgcgctcaagctcgacgacggc
acgctgcatcgtttccgcgcccagaccaccattctcgcaactggcggctatggccgcgcc
tatctctcctgcacctcggcacacacctgcaccggcgacggcggcggcatggtgctacgc
gcgggtctgccgctgcaggacatggagttcgtgcaattccatccgaccggcatctttccc
gcaggctgcctcatcaccgaaggcgcacgcggcgaaggcggctatctcgtcaatgccgag
ggcgaacgcttcatggagcgctatgcgccctccgccaaggacctcgcctcgcgcgacgtc
gtctcgcgtgcgatgaccatcgagattcgcgaaggccgcggtgtcggcaagcgcaaggac
catatgttcctgcacctcgatcatctcgatccggcagtgctgcacgaccggttgccgggc
atctcggaatcggcgcgcattttcgcaggcgtcgacgtcacccgcgaaccgatcccggtg
ctgccgacggtgcactacaacatgggcggcatcccgaccaacttccacggcgaagtggtt
gtgaagaagcgcggcgacgacgacgccgtggtgcccggcctgatggcggtcggcgaagcc
gcctgcgtctccgtgcatggcgcgaaccgcctcggctcgaactcgctgatcgatctcgtc
gtgttcggccgctcggcggcgctgcgctgcgccgagaagctcacgccgaacggcaagcag
ccggagttgcccgccgattccgccgagaaggccctcgcccgtctcgaccacttccgttac
gcctccggcggcacgccgaccgcaaagctgcgcgattccatgcagcgcgtgatgcagaac
aactgcgcggtgttccgcaccggcgaagtgctgcacgagggcaaggacctgatccacaag
gtccacagcggactcaccgacatcagcgtcaccgaccgctcgctgatctggaacaccgat
ctcgtcgagactctcgaattcgacaacctcatcattcaggcggtggtgacgatggaatcc
gctgtcaaccgcaccgagagccgcggcgcgcatgcgcgcgaggatttcccggagcgcgac
gacaagaactggatgaagcacacgctggcgtggatcgaccccaaggccaacaccacgatc
gattaccgcccggtgcacagctacacgatgaccaacgacattcagtacatcccgccgaag
gcgcgcgtgtactga
DBGET
integrated database retrieval system
