Afipia carboxidovorans OM5 (Mississippi): OCAR_4388
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Entry
OCAR_4388 CDS
T00783
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca03030
DNA replication
oca03430
Mismatch repair
oca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OCAR_4388 (dnaQ)
03430 Mismatch repair
OCAR_4388 (dnaQ)
03440 Homologous recombination
OCAR_4388 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oca03032
]
OCAR_4388 (dnaQ)
03400 DNA repair and recombination proteins [BR:
oca03400
]
OCAR_4388 (dnaQ)
Enzymes [BR:
oca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OCAR_4388 (dnaQ)
DNA replication proteins [BR:
oca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OCAR_4388 (dnaQ)
DNA repair and recombination proteins [BR:
oca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OCAR_4388 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACI91534
UniProt:
B6JAK9
LinkDB
All DBs
Position
372808..373500
Genome browser
AA seq
230 aa
AA seq
DB search
MREIVLDTETTGLDALRGDRLVEIGCVEMFNHMPTGQTYHVYINPERDMPQEAFAVHGLS
TEFLADKPLFAAVADEFLEFIGDAPLIIHNASFDIGFINMELDRLKRAAIPCERLVDTLL
LARRKHPGVSNRLDDLCSRYAIDNSRRTKHGALLDAELLAEVYIDLIGARQSSLILAETE
RTQIHVVEVTRRVREVPLASRITVEEREAHRAFVATLGDHPLWAEFKDAD
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaattgttctcgacaccgaaaccaccggcctcgatgcgctgcgtggcgatcgt
ctggtcgagatcggctgcgtcgagatgttcaatcacatgccgaccgggcagacctatcac
gtctacatcaacccggaacgcgacatgccgcaggaagcctttgcggtgcacggcctgtcg
actgaatttctcgccgataagccgctgttcgccgcggtggccgacgagttcctcgagttt
atcggcgacgcgccgctcatcattcacaacgcctcgttcgatatcggcttcatcaacatg
gagctcgaccgtctgaagcgtgcagcgattccgtgcgaacgccttgtcgatacgctgttg
ctcgcacgccgcaagcatccgggcgtctccaaccggcttgatgatctgtgctcgcgttat
gcgatcgacaattcgcggcgcaccaagcacggcgcattgctcgacgccgagctgctggcc
gaggtctatatcgatctgatcggcgcacggcagtcctcgctcatcctggcggagacggag
cgcacgcagattcacgttgtcgaggtgacgcgccgcgtgcgcgaagtgccgctggcgtcg
cgcatcaccgtggaggagcgcgaggcgcatcgcgcgtttgtcgcaacgctcggcgaccat
ccgctctgggcggaattcaaggacgcggactaa
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