Afipia carboxidovorans OM5 (Mississippi): OCAR_4472
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Entry
OCAR_4472 CDS
T00783
Symbol
rpsA
Name
(GenBank) ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
OCAR_4472 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
oca03011
]
OCAR_4472 (rpsA)
Ribosome [BR:
oca03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
OCAR_4472 (rpsA)
Bacteria
OCAR_4472 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
ACI91617
UniProt:
B6JCN7
LinkDB
All DBs
Position
455609..457309
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AA seq
566 aa
AA seq
DB search
MASTESSYHPTRDDFAAMLDESFSGGNLQESSVVKGKVVAIEKDMAVIDVGLKTEGRVAL
REFNGPGRENTLKVGDEVEVFLDRIENALGEAVLSRDKARREESWGKLEKAFNANEKVSG
IIFNQVKGGFTVDLDGAVAFLPRSQVDIRPIRDVAPLMNNPQPFQILKMDRRRGNIVVSR
RTVLEETRAEQRQELVQNLEEGQVIDGVVKNITDYGAFVDLGGIDGLLHVTDIAWRRVNH
PTEVLTIGQTVKVKIIKINHETHRISLGMKQLLDDPWQGIEAKYPLNARVTGRVTNITDY
GAFVELEPGIEGLIHVSEMSWTKKNMHPGKIVSTSQEVEVQVLEVDSAKRRISLGLKQTM
RNPWEVFVEKFPVGSTVEGEVKNKTEFGLFLGLEGDVDGMVHLSDLDWKQPGEQVIDNFK
KGDMVKAVVLDVDVEKERISLGVKQLEGDPFAEPGDVKKGAVVTCEILDVKDAGIDVQIA
GTDFTTFIKRSELARDRNDQRAERFAVGEKVDARVIQFDKKARKVQVSIKALEVAEEKEA
IAQYGSSDSGATLGDILGNALKKRDK
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgactgaatcctcctatcatccgacccgcgacgatttcgcggcgatgctcgat
gaatccttctcgggcggcaacctgcaggaaagctccgtcgtcaagggcaaggttgtggcg
atcgagaaggacatggccgtcattgacgtcggcctcaagaccgaaggtcgcgtggcgctg
cgcgagttcaacggccccggccgcgagaacacgctgaaggtcggcgacgaagtcgaagtc
tttctggaccggatcgaaaacgcgctcggtgaagccgttctctcgcgcgacaaggcgcgc
cgcgaagagagctggggcaagctcgagaaggcgttcaacgccaacgagaaggtttccggc
atcatcttcaaccaggtcaagggcggcttcacggtcgacctcgacggcgccgtggcgttc
ctgccgcgcagccaggtcgacattcgcccgatccgcgatgtcgcgccgctgatgaacaat
ccgcagccgttccagatcctcaagatggatcgccgccgcggcaacatcgtcgtgtcccgc
cgcaccgttctcgaagagacccgcgccgaacagcgtcaggagctcgtgcagaacctcgaa
gagggtcaggtgatcgacggcgtcgtcaagaacatcaccgattacggtgcgttcgttgac
ctcggtggcatcgacggcctcctgcacgtcaccgatatcgcgtggcgccgcgtcaaccat
ccgaccgaggtgctcaccatcggccagacggtgaaggtcaagatcatcaagatcaaccac
gagacccaccgcatctcgctcggtatgaagcagctcttggacgatccgtggcagggcatc
gaggcgaagtatccgctcaacgcccgcgtcaccggccgcgtcaccaacatcaccgactac
ggtgcgttcgtcgagctcgagccgggcatcgaaggcctgatccacgtctccgagatgtcg
tggaccaagaagaacatgcatcccggcaagatcgtctccacctcgcaggaagtcgaagtg
caggtgctggaagtcgattccgccaagcgccgcatctcgctcggtctcaagcagaccatg
cgcaatccgtgggaagtgttcgtcgagaagttcccggtcggctcgaccgtggaaggcgag
gtcaagaacaagaccgagttcggtctgttcctgggtctcgaaggcgacgtcgacggcatg
gtgcatctgtccgacctcgattggaaacagccgggcgagcaggtgatcgacaacttcaag
aagggcgacatggtcaaggccgtggtgctcgatgtcgatgtcgagaaggagcgcatctcg
ctcggcgtcaagcagctcgagggcgatcccttcgcagagccgggcgacgtcaagaagggc
gcggtcgtgacctgcgagattctcgacgtcaaggacgccggcatcgacgtgcagatcgcc
ggtaccgacttcaccaccttcatcaagcgttcggagcttgcgcgtgatcgcaacgatcag
cgtgccgagcgcttcgcggttggtgagaaggtcgacgcccgcgtcatccagttcgacaag
aaggcccgcaaggtccaggtgtcgatcaaggcgctggaagtcgccgaggagaaggaagcc
atcgcgcagtacggctcgtccgactccggcgcgacgcttggcgacattctcggcaacgca
ctgaagaagcgcgacaagtaa
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