Afipia carboxidovorans OM5 (Mississippi): OCAR_4638
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Entry
OCAR_4638 CDS
T00783
Symbol
cydB
Name
(GenBank) cytochrome D ubiquinol oxidase subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00190
Oxidative phosphorylation
oca01100
Metabolic pathways
oca02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
OCAR_4638 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OCAR_4638 (cydB)
Enzymes [BR:
oca01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
OCAR_4638 (cydB)
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GFIT
Motif
Pfam:
Cyt_bd_oxida_II
BacA
Motif
Other DBs
NCBI-ProteinID:
ACI91781
UniProt:
B6JD51
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All DBs
Position
complement(628415..629428)
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AA seq
337 aa
AA seq
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MSAMFDIPTVWAFIIAFAVFAYVVMDGFDLGLGMLFPLFSEKEERDVIMNSVAPVWDGNE
TWLVLGGGGLMAAFPLAYAVLMPALYTPMIAMLIGLIFRGVAFEFRWRSQSEGRNRWDAA
FAGGSLIAALSQGIALGAILQGVPVEGRGYGGGWWDWLTPFSILTGLSVVAGYSLLGATW
LVMKTEGGLRDRAYHLSWRLLFATIAAIGAVSLATPFLQNGYAERWFDWPNIMLTAQVPL
AVAIVTALLMVNLKNRHDYRPFFLTLLLFALSYAGLGISMWPYIVPNSITIWDAAAPEKS
LTFMLVGVAILVPLILIYTSWAYWVFRGKVQAGSGYH
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgatgttcgacattccgacggtctgggcgttcatcatcgccttcgcggtgttt
gcctatgtggtgatggacggcttcgacctcggtctcggcatgctgtttccgctgttctcc
gaaaaggaggagcgcgacgtcatcatgaattcagttgcgccagtgtgggacggcaacgag
acctggctcgtgctcggcggcggcggactgatggcggcctttccgctcgcctatgcggtg
ctgatgcccgccctctacacgccgatgatcgcgatgctgatcggcctcatcttccgtggc
gtggcatttgaattccgctggcgctcgcagagcgagggccgcaatcgctgggacgcggcg
ttcgccggaggttcgctgatcgccgcgctgtcgcagggcatcgcgctcggcgccattctg
cagggtgtgccggtcgagggccgcggctatggcggcggctggtgggactggctgacgccg
ttcagcatcctgaccggcctctccgtcgtcgccggctacagcctgctcggcgcgacgtgg
ctcgtgatgaaaaccgaaggggggctgcgcgatcgcgcctatcatctgagctggcggctg
ttgtttgcgaccatcgccgcgatcggtgctgtgagcctcgccacaccgttcctgcaaaat
ggttatgccgagcgctggttcgactggccgaacatcatgctgacagcgcaggtgccgctc
gcggtcgccatcgtcacagcgctgttaatggtgaatctgaagaaccgtcacgactatcgc
ccgttcttcctcacgctccttctgttcgcactgtcctatgccggactcggcatcagcatg
tggccctatatcgtgccgaacagcatcacgatctgggacgcggccgcgccggagaagagc
ctgaccttcatgctggtcggtgtcgcgatcctggtccccctcattctcatctacacctca
tgggcctactgggtgttccgcggcaaggtgcaggcgggaagcggctaccattga
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