Afipia carboxidovorans OM5 (Mississippi): OCAR_4668
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Entry
OCAR_4668 CDS
T00783
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OCAR_4668 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oca01007
]
OCAR_4668 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oca03016
]
OCAR_4668 (lysS)
Enzymes [BR:
oca01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
OCAR_4668 (lysS)
Amino acid related enzymes [BR:
oca01007
]
Aminoacyl-tRNA synthetase
Class I (A)
OCAR_4668 (lysS)
Transfer RNA biogenesis [BR:
oca03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OCAR_4668 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
Methyltransf_8
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
ACI91810
UniProt:
B6JD98
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All DBs
Position
657072..658721
Genome browser
AA seq
549 aa
AA seq
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MSETITRFEDMSAADLRAFAEQSNAWPFEQARQIVARLKKKPKDEVLFETGYGPSGLPHI
GTFGEVARTSMVRHAFRVLTEDKIKTRLLAFSDDMDGLRKVPDNVPNKEMLEEDLGKPLT
KVRDPFGTHDSFGAHNNARLRAFLDTFGFDYEFASSTDYYTSGRFDETLLKVLAKIDEVM
AIMLPSLREERAASYSPFLPICPRTGVVLQVPIVAHDAKAGTVSYDDPETKDRVTVPVTG
GHCKLQWKPDWAMRWVALGVDYEMAGKDLIDSVKLSGKICRALGGTPPEGFNYELFLDDK
GQKISKSKGNGLTIDEWLRYASPESLALFMYREPKAAKRLYFDVIPRNVDEYQQFLDGYA
RQDAKQRLGNPVWHIHSGKPQASDMPVTFQLLLTLVSSSNAENAETLWGFIGRYRPGVTP
QTHPRLNALVGYAINYYRDFVAPSKEFRAPSESERVALQDLRDALAQLPADASAEDIQNV
VYEIGRREPFLDHKKAGKDGRPGVSLDWFNMLYQVLLGQEKGPRFGSFVAVYGLANAVGM
IDAALARSA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagacgatcacgcgatttgaagatatgtcggcggcggacctgcgcgcgttcgcc
gagcaatccaacgcctggccgttcgagcaggcgcggcagatcgtggctcgcctgaaaaag
aaaccgaaggacgaggtgttgttcgagaccggctacggtccctcgggcctgccgcatatc
ggcacgttcggcgaagtcgcgcgcacatcgatggtgcgccatgccttccgtgtgctcacc
gaagacaagatcaagacgcggcttctcgccttctccgacgacatggacggcctgcgcaag
gtgccggacaacgtgccgaacaaggagatgctggaagaggacctcggcaagccgctgact
aaggtgcgcgatccgtttggcacacatgacagcttcggtgcgcacaacaatgcgcgcctg
cgcgccttcctcgatactttcggtttcgactatgaattcgcatcttcgaccgattactac
acgtcgggacgcttcgacgaaacgctgctcaaggtgctcgcgaagatcgatgaggtgatg
gcgatcatgctgccgtcgctgcgcgaggagcgtgcggcgagctactcgccgttcctgccg
atctgcccgcgcaccggcgtggtgctgcaggtgccgatcgtggcccacgatgcgaaagcc
ggcaccgtctcctatgacgatccggagacgaaggaccgcgtcactgttccggtcaccggc
gggcattgcaagctgcagtggaagcccgactgggcgatgcgctgggtcgcgctcggcgtc
gattacgagatggcgggcaaggatttgatcgactcggtgaagctgtccggcaagatctgc
cgcgcgctgggcggcacgccgccggaaggcttcaactacgaactgttcctcgacgacaag
ggccagaagatttccaagtcgaagggcaacggcctcactatcgacgagtggctgcgctat
gcctcgccggaatcgctggcgctgttcatgtatcgtgagccgaaggcagccaagcgcctc
tacttcgatgtgatcccgcgtaacgtcgatgagtatcagcaattcctcgacggctatgcg
cggcaggatgccaagcagcggctcggcaatccggtgtggcacattcactcggggaagccg
caggcctccgacatgccggtgacgttccagctcttgctgacgctggtgtcgtcgtcgaat
gcggagaacgccgagacgctgtggggtttcatcggccgctatcggccgggtgtaacgccg
cagacccatccgcgcctcaatgcgctggtcggttatgcgatcaactactatcgcgatttt
gttgcgccctcgaaggagtttcgcgcgccgagcgagagcgagcgtgtggcgttgcaggat
ctgcgcgacgcgctggcgcaactgcctgccgatgcatcggccgaagacatccagaacgtc
gtctacgagatcgggcggcgcgagccgttcctcgatcacaagaaggcgggcaaggatggc
cggccgggcgtgtcgctcgactggtttaacatgctctatcaggtgctgctcgggcaggag
aaaggcccgcgcttcggttcgttcgttgcggtctatggccttgccaatgcggtcgggatg
atcgacgcggcgctggcgcgtagcgcttga
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