Afipia carboxidovorans OM5 (Mississippi): OCAR_4954
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Entry
OCAR_4954 CDS
T00783
Name
(GenBank) recombinase
KO
K06400
site-specific DNA recombinase
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
OCAR_4954
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Resolvase
Recombinase
Motif
Other DBs
NCBI-ProteinID:
ACI92090
UniProt:
B6JB16
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All DBs
Position
complement(928124..929746)
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AA seq
540 aa
AA seq
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MTSAGKSVRCAIYTRVSTDAGLDQKFNSLDAQYDASEAYIRSQAHANWTLIKRRYDDGGF
SGGSTDRPALQKLLDDVRARKINVIVVYKVDRLTRSLADFAKLVELFDAHGVSFVSVTQQ
FNTTTSMGRLTLNVLLSFAQFEREVTAERIRDKIAASKRKGLWVGGMVPLGYALSDGKLS
IHQDEAKTVRLIFERYLELGSANRLVADLKTRGLTSKIRKLSSGAIRGGVPFTQGPLFYI
LRNRFYIGEVTFKGEVLPGPQPPLLERSLFEAVQAKLTEQWSHRTRARQKSEALLTGLLF
DDAGNRMIPTHATKNRVRYRYYISQPLQRGHSDDPVGSISRAPADQIEVLVTNAVRDRLT
ESGKWSQSLSEQNAVAAHIAKVEVRAKQLAVTLKATDPTPHYDHELAQRDDAGMVIVIPW
TKPPMRKFRDVIRPASASTRRTRPIRAERRVGLIRAIARGRQWLDEITSGRLTIEEIAVR
QKCSVRQINLTLSMAFLAPPLVKAAIEGRLPRGIGIAQLRDAPPEWSKQYVKLGLPMLQL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggctggcaaatccgtccggtgtgcgatctatacccgcgtctcgaccgatgcc
ggccttgatcagaaattcaactcgcttgacgcccagtatgatgcatccgaagcctatatc
cgcagtcaggcgcatgcgaactggacgctgatcaagaggcgctatgacgatggagggttc
tcgggcggatcaaccgaccgccctgcccttcaaaagttgctcgatgatgtcagggcacgc
aagatcaatgtcattgtcgtctataaggtcgaccgcctaacacgttcgctggccgacttt
gccaagctggttgaattgttcgacgctcatggcgtgtcattcgtctcggtgacccagcaa
ttcaatacgacgacatcgatgggtcgtttgaccctgaatgttctcttgtcctttgcccaa
ttcgaacgcgaggtcacagccgagcgtatccgcgacaagatcgccgcctccaagcgcaag
ggcttgtgggtcggaggcatggttccgctcggttacgcgctgagcgacggcaagctctcc
atccaccaggacgaagcaaaaaccgttcggctcattttcgaacgctaccttgaactgggc
agcgccaatcgcctggtcgctgatctcaagaccagaggactgacctccaaaattcgcaaa
ctctcaagcggcgccatccggggcggcgttccgttcacccaaggcccgctgttctacata
ctgcgcaaccgattctatatcggcgaggttacattcaagggcgaggtcctgcccggacca
caaccgcctttgcttgagcgatccctgttcgaggccgtccaagccaagctcaccgagcaa
tggtcccatcgaaccagggccaggcaaaaatccgaagcgcttctcacgggattgctgttc
gacgatgctggcaaccgaatgatcccaactcatgcaacgaagaaccgcgtgcgctaccgc
tactatatttcccaaccgctgcaacgcggtcattccgatgatccggtggggtccatatct
cgcgcccccgcagaccagatcgaggtgctggtcaccaacgccgtacgagaccgattgacg
gaatctggcaaatggtcacagtcgctctcggagcaaaatgccgttgcagcccatatcgca
aaagtcgaggttcgtgccaaacaattggctgttacccttaaggcgaccgatccgacgcca
cattacgatcacgaattggctcaacgcgacgatgctggcatggttatcgtgattccatgg
accaagccgccgatgcgcaagttccgagacgtgatccgacccgcatccgcttcgacccgg
cgaacacgaccgatccgcgctgagcgtcgcgtaggcctgatccgtgccattgcgcggggt
cggcaatggttggacgagatcacctccgggcgattgaccatcgaagagattgcggtcagg
caaaaatgcagcgttcggcaaatcaatctgacgctgtcgatggctttcctcgcgccgcca
ttggtcaaggccgcaatcgaaggtcgcctgccccgtggcataggcatcgcgcaactacgc
gatgcaccgcccgaatggtcgaaacagtatgtgaagcttggattgcccatgcttcagtta
tga
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