Afipia carboxidovorans OM5 (Mississippi): OCAR_5017
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Entry
OCAR_5017 CDS
T00783
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oca03032
]
OCAR_5017
03036 Chromosome and associated proteins [BR:
oca03036
]
OCAR_5017
03400 DNA repair and recombination proteins [BR:
oca03400
]
OCAR_5017
DNA replication proteins [BR:
oca03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OCAR_5017
Chromosome and associated proteins [BR:
oca03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OCAR_5017
DNA repair and recombination proteins [BR:
oca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OCAR_5017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
CbiK
Motif
Other DBs
NCBI-ProteinID:
ACI92152
UniProt:
B6JBT6
LinkDB
All DBs
Position
complement(986838..987137)
Genome browser
AA seq
99 aa
AA seq
DB search
MATQMTKSQLIEKIAETNELSKRDVKGVLESLATLGYKELKKNGVFLVPGFAKFVVIKKP
ATKARKGTNPFTGEPMTFKAKPARKIVRARPVKAAKDAV
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggccactcaaatgacgaaatcgcagctgatcgaaaagatcgctgaaacgaacgaactc
tcgaagcgggacgtcaagggcgttctcgaatcgctcgccaccctcggctacaaagaactt
aagaagaacggggtgtttctcgtcccgggcttcgccaagtttgtcgtgatcaagaagccg
gcaacgaaggcccgcaaaggcaccaacccgttcaccggcgagccgatgacgttcaaagcc
aagcccgcccgcaagatcgtgcgtgcgcgcccggtcaaggctgccaaggacgccgtttaa
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