Afipia carboxidovorans OM5 (Mississippi): OCAR_5120
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Entry
OCAR_5120 CDS
T00783
Name
(GenBank) PAS/PAC sensor signal transduction histidine kinase
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
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Gene cluster
GFIT
Motif
Pfam:
PAS_8
HisKA
PAS
PAS_4
HATPase_c
PAS_9
PAS_7
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
ACI92255
UniProt:
B6JC39
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Position
complement(1090694..1093894)
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AA seq
1066 aa
AA seq
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MPTADFSLLAIHDERLAALSLAAAPAWVWSTDGEHLLWANAAGCAFFGADNEAALLAKHF
GPADPHRRQVKQLAPRLSSSGALRLERLRGFGAPLGGLMTCGCAKVSLRGTEGILIAAEL
PWTRVPAFSERVAALIESIEQPAIAFAEGRPLAANSAARMLGDLTSVAPRLLDGVREADI
KQGSTTLDTPLGPATLHRAGSGAESALILLLPSAAVPAPVAAPAQPDKPVDAAPAPVAGT
AANGDAAASRAAAGNEPAAPGFAMPDDTPMDDSAAPETSSGMAPAAPSELLPLPDDPAVR
RRHPLRFTWAMDAEGRFSLGSDEFTHLIGVQTTAAFSRKWSEVSTELTLDPEDHVAQAVA
TRATFSGILLHWPVDGVSGRLPVELSGLPVYGRDRTFAGYRGFGICRDLDGLTRLAAQRR
RDALFGSTPATAPASQTHEQPEAQEPVAIAEMHEPPAHEPPTHEAEPETIEAIEAPANVV
PFRPANDDGPTLALTPGETNAFQELARQLSARLESEVEQRRSALHAEEADDSTAEQPHDD
AIFDTEEDATPDEASTQLRRPAPSQNTSLIDRLPLGVLIYRADRLLHANATFLAATGYAS
LAALNKDGGLGALYVGPGVADVSAADDGTPIKVSTLAMGEDNGRNARLHTIDWDGESALA
LILSPDSPQPQAEHAAPVAIAEPPPPAEARIEADELATILETTAEGVVMFDGDGRVIACN
RSAEALFSRDGTDLEGQNLIELFAPESQRAVLDYLEDIKSDAMESLFEQGRDVLGRAPDG
GAMALSVTMGRTRPGRARYFAVFRDKPPPAFTAPVASPLRAAEQAKRADEKAASAKADLL
ARLSHEVRAPVSAIIGFADVMIEERFGALGNERYIDYMKDIRASGERVISIIDDMLDLSR
IESGKLDLDFTPQDLNALVEQCVGMMQPQANRERIIIRSSLTHGLPNIEADTHALRQIAL
TLIGTAIHLANAGGQVIVSTALTDLGEVALRIRDTGQGMNDNEIAAAMAPFRTPSPADEV
AAGNGANLSRAKALIEANRGRFHIKSAPNAGTLIEAVFSQAAAQAV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
gtgcctacagccgatttttccctgctggcgatccatgacgagcggcttgcggcgctctct
ctcgccgcagcccccgcctgggtgtggtcgactgacggcgagcatctgctctgggcaaat
gccgcaggctgcgctttcttcggcgcggacaacgaagccgcactgctcgccaagcacttc
ggcccggccgatccgcaccgccgccaggtgaagcagttggctccgcgcctctcatcatcg
ggggcattgcggctcgagcggctgcggggattcggcgcgccgctcggcgggctgatgacc
tgcggctgcgcaaaagtctcgctcaggggcaccgagggcatcctgatcgcggccgaattg
ccgtggacgagagtgccggcgttctccgagcgtgtcgccgcgctgatcgagagcatcgag
cagcccgcgattgctttcgccgagggacggcccctcgccgccaactccgctgcgcggatg
ctgggcgacctcacatccgtcgcgccgcgccttctggatggcgtgcgcgaggccgacatc
aagcaaggttcgacaactctcgacacaccactcggacccgccacgctccaccgcgccggc
agcggggcagagagcgcgctgatcctgttactgcctagcgcggctgtgcctgcgcctgtc
gcggctccagcgcagcccgacaaacccgttgacgccgcgcccgcccctgttgccggaacc
gccgcaaacggcgacgctgcggcttcacgcgcggccgccgggaatgagccggccgcgcca
ggatttgcgatgccggacgacacccctatggatgacagcgcggccccggagaccagctcc
ggcatggccccggctgcgccgtccgagcttctcccgctcccggacgaccccgccgtgcgg
cggcggcatccgctgcgcttcacctgggcgatggacgccgaggggcgcttttcgcttggc
tccgacgaattcactcatctgatcggcgtgcagaccaccgcggccttcagccggaaatgg
agcgaggtcagcaccgagcttacgctcgatcccgaggatcacgtcgcacaggcggtggca
acccgcgcgacgttcagcggcattctgctgcactggccggtcgacggcgtgagcgggcgg
ttgccggtcgaactgtcgggcctgccggtctatggccgcgaccgcacgttcgcgggctat
cgtggcttcggcatctgccgcgatctcgacggcctcacccgcctcgccgcgcaacgccgc
cgcgatgcgttgttcggctcgacgcccgccacagcaccggcttcgcagacacacgaacag
cctgaggcacaggagcctgttgcgatcgcggagatgcacgagcctcctgcccacgagcct
cctacgcatgaagctgagcccgagaccatcgaggcgatcgaagcccctgcgaacgtggtg
ccgttccgtcccgcgaacgacgacgggccgacgctggctctgacgccgggtgagaccaac
gcgtttcaggagctggcgcggcaattgtccgcgcggctggagagcgaagtagaacagcgg
cgtagcgccctgcacgcggaagaagctgacgacagtacggccgaacaaccgcacgacgat
gcgattttcgacactgaagaagacgccacgcccgatgaggcgtccacgcaactgcggcgg
cccgcgccatcgcaaaacacctcgctgatcgaccggcttccgctcggcgtgctgatctat
cgcgccgatcgcctgttgcacgccaacgccacgtttcttgcggcgaccggctatgcctcg
cttgccgcgctcaacaaggatggcggccttggcgcgctttatgttggacccggcgttgcg
gatgtatctgctgccgacgacggcacaccgatcaaggtctccactctggcgatgggcgaa
gataacggccgcaacgcgcgcctgcacaccatcgattgggacggcgagagcgcgctggcg
ctgatcctgtcccccgactccccacagccgcaggcggagcacgctgcgcctgttgcgata
gctgaaccaccgccgcccgcagaggcgcgcattgaagcggacgaactcgctaccattctc
gagaccaccgccgagggcgtcgtgatgttcgacggcgacggccgcgtcatcgcctgcaac
cgcagcgcggaggcgctgttcagccgcgacggcaccgacctcgaaggccagaacctgatc
gaactgttcgcgccggaaagccagcgcgccgtgctcgactatctcgaggacatcaagtcc
gatgcgatggaaagcctgttcgagcagggccgcgacgtgctcggccgcgcacccgacggt
ggcgcgatggcactctccgtcaccatgggacgcaccaggcccggacgcgcgcgctatttc
gcagtgttccgcgacaagccgccgccggctttcactgcgcccgtggcgtcgccgctccgc
gccgccgaacaggccaagcgcgccgacgagaaagcggcgagcgccaaggccgatctgctc
gcgcgactgagccacgaagtgcgcgccccggtcagtgccatcatcggctttgccgacgtg
atgatcgaggagcggttcggcgctctcggcaacgagcgctacatcgactacatgaaggac
atccgcgcctccggcgagcgcgtgatttccatcatcgacgacatgcttgatctgtcgcgg
atcgaatccggcaagctcgatctcgatttcacaccgcaggacctcaacgcactcgtcgag
cagtgcgtcggcatgatgcagccgcaggccaaccgcgagcgcatcatcatccgctcgtcg
ctgacccatggtctgccgaacatcgaagccgacacgcatgcgctgcgccagatcgcactg
acgctgatcggcaccgcgatccatctcgccaatgccggcgggcaggtgatcgtctcgacc
gcgctcaccgacctcggcgaagtcgcgctgcgcatccgcgacaccggtcagggcatgaac
gacaacgaaatcgccgcggcgatggcaccgttccgcacgccctctcccgccgatgaagtc
gcggccggcaacggcgccaacctgtcgcgcgccaaggcgctgatcgaggccaaccgcggc
cgcttccacatcaaaagcgcgccgaacgccggtacgctgatcgaggcggtgttttctcag
gccgccgcgcaggcggtctga
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