Afipia carboxidovorans OM5 (Mississippi): OCAR_5140
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Entry
OCAR_5140 CDS
T00783
Name
(GenBank) DNA primase
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OCAR_5140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oca03032
]
OCAR_5140
Enzymes [BR:
oca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
OCAR_5140
DNA replication proteins [BR:
oca03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OCAR_5140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNAG_N
Zn_ribbon_DnaG
Toprim_4
Toprim_2
Toprim
DnaB_bind
Toprim_3
NIR_SIR
Motif
Other DBs
NCBI-ProteinID:
ACI92273
LinkDB
All DBs
Position
1111089..1113086
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AA seq
665 aa
AA seq
DB search
MRFTPQFLEDLRARLPVSEVVGKRVKLKRAGKEWKGLSPFHQEKTPSFTVNDQKGFYHDF
SSGKHGNIFDFIMETEGVGFVEAVERIAAMAGVALPAVTPDAARHEQRRKTLYEVMELAA
KFFADTLTSRSGARARGYLADRGISGATQLQFRMGYAPPDRFALKEHLGGLGVSVDDMIE
ARLLSAGDDIPVPYDRFRDRVMFPITDQRNRIIAFGGRAMEKDAPAKYLNSADGVLFHKG
DNLYNQAMARQAVRDGAPVIVAEGYVDVIALVGAGFPGAVAPLGTALTENQLALLWRMAD
EPVLCFDGDGAGQRAALRAASLALPHLKPGKSLRFAMMPEGQDPDDLARSGGRAALDEVF
AAARPLADVVWAMATEGVDFATPERRAALEARLGDLMREIGDEVVRRYYRQDFAERLRRM
FAPETTGTGGGYGGPRNGFRNESARRFPARNGPGSAMRPGGRGGLSTAAFALGRGPYQAM
SPQLANSPLIRGQRSTLSRREALILQSLLNHPWLLQDHLEEAAKLELAHPDSVKLREGII
AAFAQYGATDDSEAERSRIADWLARNGFSKQIQMVESTLTTRNVWGAEAGAAREDVLATW
HQLVALHRQSHALLRELKDAEQALGHENTEAHVAWLQDVKARLAAADGLEALIEGFGESS
GRFRA
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcacgcctcaatttcttgaagatctgcgcgcgcggcttccggtctcggaagtc
gtgggcaagcgcgtgaagttgaagcgggccggcaaggagtggaagggcctctcgcctttc
catcaggaaaagacgccctcgttcacggtgaacgaccagaagggtttctaccacgacttc
tcttcgggcaagcacggcaacatcttcgacttcatcatggagaccgaaggcgtcggcttc
gtcgaggcggtggagcggatcgcggcgatggcgggcgtggcgctgcccgcggtgacgccg
gatgccgcgcggcacgagcagcgccgcaagacgctctacgaggtgatggaactggccgcg
aagttcttcgcggacacgctcacttcgcgcagcggcgcgcgggcgcgcggctatctcgcc
gaccgcggcatttccggggcgacgcagttgcagttccgcatgggctacgcgccgccggat
cgtttcgccttgaaggagcatctcggcggtctcggtgtatcggttgacgacatgatcgag
gcgcggctcctcagcgccggcgacgacattcctgtcccctacgatcgcttccgcgatcgc
gtgatgtttccgattaccgatcagcgcaaccgcatcatcgcgttcggcggccgcgcgatg
gagaaggatgccccggcgaaatatctgaactccgccgacggtgtgctcttccacaagggc
gacaatctctacaatcaggcgatggcgcggcaggcggtacgtgacggcgcgccggtgatc
gtcgctgaaggttatgtcgatgtgatcgcgctggtcggcgcgggctttcccggcgcggtg
gcgccgctcggcaccgcgctgaccgagaaccagctcgcgctgttgtggcggatggcggat
gagccggtgctgtgtttcgatggcgacggcgcgggccagcgcgcggcgttgcgtgcagcc
tcgcttgcgctgccgcatctcaagcccggtaagagcctgcgctttgcgatgatgccggaa
gggcaggaccctgacgaccttgcgcgcagcggcggccgcgccgcgctcgatgaagtgttc
gctgccgcccgtccgcttgcggatgtggtgtgggcgatggcgactgaaggtgtggacttc
gcaacgccggagcggcgcgcggcgctcgaggcgcggctgggcgacctgatgcgcgagatc
ggcgacgaggtggtgcggcgctattatcggcaggattttgccgagcggctgcgccggatg
ttcgcgcccgagacgacggggacggggggcggctatggcgggccgcgaaacggcttccgc
aacgaatcagcacgccgctttccggcgcggaatgggccaggttccgccatgcggccgggg
gggcggggcgggctgtccacagccgcgtttgcgcttggccgggggccttatcaggcgatg
agcccgcagcttgcgaactcgccgctgatccgcggccagcgcagcacgctgtcgcgccgc
gaggcgctgatcctgcaatcgctcctcaatcacccctggcttttgcaggatcaccttgag
gaagcggcaaaactcgagctcgcccacccggattcggtgaaattgcgcgaaggcattatc
gcggcgtttgcccaatatggcgcgaccgacgattccgaggcggagcgcagccggattgcc
gactggctggcacgaaatggtttttcaaagcaaattcaaatggttgagagtacactgacg
acccgcaacgtgtggggcgctgaagccggtgccgcccgcgaggatgttttagcgacctgg
caccagcttgttgccttgcatcggcagtcgcacgccctacttagggaattaaaggatgcc
gaacaggcacttgggcacgagaacaccgaggcgcatgtcgcctggctgcaggatgtcaaa
gcacggcttgcggcggcggatgggcttgaggcgctgatcgagggattcggcgaatcgtcg
gggcggttccgcgcctga
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