Afipia carboxidovorans OM5 (Mississippi): OCAR_5168
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Entry
OCAR_5168 CDS
T00783
Symbol
selD
Name
(GenBank) selenide, water dikinase
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00450
Selenocompound metabolism
oca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
OCAR_5168 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oca03016
]
OCAR_5168 (selD)
Enzymes [BR:
oca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
OCAR_5168 (selD)
Transfer RNA biogenesis [BR:
oca03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
OCAR_5168 (selD)
Prokaryotic type
OCAR_5168 (selD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
ACI92301
UniProt:
B6JC85
LinkDB
All DBs
Position
complement(1139604..1140653)
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AA seq
349 aa
AA seq
DB search
MNAPIVRLTSLAHGGGCGCKLAPAMLQELLADQPAAAPFRQLLVGVETGDDAAVWKIDDS
TCVVATTDFFMPVVDDPFDFGRIAATNAISDIYAMGAKPIMALAILGMPLNKIAVDDVRK
IIAGGNTVCNAAGIPVAGGHSIDAPEPIYGLAVIGLCRPDQVRRNADAKPGDALILTKAL
GVGIYSAAIKKGELSGDGYAEMVNSTTQLNRIGSELAEDKSVHAVTDVTGFGLLGHALEL
ARGSKLTVTLNAGDVPLFTQAAQLAQQGHVTGASTRNWASYGEAIRLPEGLPDWQRNLLV
DPQTSGGLLVSCAADRAQAILETIQRADYGAARIIGHTEAGPAEVRVTA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccctatcgtgcgcttgacgagccttgcccatggcggcggctgcggctgcaaa
ctcgcccccgcgatgctgcaggaactgctcgccgaccagcccgcagcggcgccgttccgc
cagttgctggtcggcgtcgagaccggtgacgacgccgcagtgtggaagatcgacgattcc
acctgcgtggtcgccaccacggattttttcatgccggtggtcgacgacccattcgacttc
ggccgaatcgccgcgaccaacgcgatctccgacatttacgctatgggcgcgaagccgatc
atggcgctcgcaatcctcggcatgccgctcaacaagatcgccgtcgatgacgtgcgcaag
atcatcgcgggtggaaacaccgtctgtaacgccgccggcattccggtggcgggtggtcac
tcgatcgacgcacccgagccgatttatggccttgctgtcatcggcctctgccgccccgat
caggtgcgccgaaatgccgacgccaagcctggcgacgccctgatcctgaccaaggcgctc
ggcgtcggcatctattccgccgctatcaagaagggtgaactctcaggcgatggctacgcc
gaaatggtcaactcgaccacgcagctcaaccgcatcggcagcgagcttgccgaggataag
tccgttcacgccgtcactgatgtcaccggtttcggcctgctcggccatgcgctggagctc
gcgcgcggctcaaaattgaccgtcacgctgaatgccggcgatgtgccgctattcacgcaa
gccgcacagcttgcccagcagggccatgtcaccggtgcttcgacccgcaactgggcaagc
tatggcgaggcgatccgcctgcccgagggcctgcccgactggcagcgcaatctgctggtc
gatccgcagacctcaggcgggctgttggtctcctgcgctgctgaccgtgcacaggcgatc
ctggagacgatccagcgcgccgactacggcgctgcacggatcatcggtcataccgaggcg
ggccccgccgaggtgcgcgtcacggcgtaa
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