Afipia carboxidovorans OM5 (Mississippi): OCAR_5238
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Entry
OCAR_5238 CDS
T00783
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00300
Lysine biosynthesis
oca00550
Peptidoglycan biosynthesis
oca01100
Metabolic pathways
oca01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OCAR_5238
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OCAR_5238
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
OCAR_5238
Enzymes [BR:
oca01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
OCAR_5238
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ACI92370
UniProt:
B6JCF4
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All DBs
Position
1213552..1214988
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AA seq
478 aa
AA seq
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MTTALWTTAAMAEAMHATRSGALPESINGISIDSRTIAPGEAYFAIKGDVHDGHAFVEAA
LKNGGGLAVIAQSQRAKFSGDLPLLVVPDVLAGLVDLAKAARARTQAKIVAVTGSVGKTS
TKEALRTVLQAQGATHVSAASFNNHWGVPLSLARCPQDAKFAVFEIGMNHAGEIEPLVKL
VRPHVAIITTVEPVHLEFFSGIEAIADAKAEIFTGLEPGGAAILNRDNSQFARLAERAKA
CGVARIVTFGENEHADARLLDVALHAECSAVHADVLDHDVTYKVGVAGRHMAMNSLAVLA
ASTLVGGDLALSALALAAFEPTAGRGVRHALGLPGGTATLIDESYNANPASMAAAMSVLG
RVAIGPQGRRIAVLGDMLELGPQGRELHRGLAAAITANRIDLVFCCGPLMHDLWDALPSA
RKGGYSETSVGLESQLVAGVRAGDAIMVKGSLGSRMKVIVTALEKNFPNGADADDLTV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggcgctgtggaccacggctgcgatggcggaggcgatgcacgccacgcgaagc
ggcgcgctgccggagagcatcaacggcatttccatcgacagccgcaccatcgcgccgggc
gaagcttatttcgccatcaagggcgacgtgcatgacggccacgccttcgtcgaggcggca
ctgaagaacggcggcggcctcgcggtgatcgcgcaatcgcagcgcgcgaaattttccggc
gacctgccgctcttagtggtgccggatgtgctcgcgggccttgtcgatctcgcgaaagcc
gcgcgcgcgcggacacaggcgaagatcgttgcggtgacaggctcggtcggcaagacctcg
accaaggaagcgttgcgcaccgtgctgcaggcgcagggcgcgacgcatgtgtcggcggcg
tccttcaacaaccattggggcgtgccgctgtcgctcgcgcgctgcccccaagatgcgaag
ttcgcggtgttcgagatcggcatgaaccacgcaggcgaaatcgagccgctggtgaagctg
gtgcgcccgcatgtcgcgatcatcaccacggtcgagccggtgcatctcgaattcttttcc
ggcatcgaggcgattgccgatgccaaggcggaaattttcaccggcctcgagccgggcggc
gctgcgatcctcaatcgcgacaattcgcagttcgcgcgccttgcggagagggcgaaggcg
tgcggcgtcgcgcgtatcgtcacgttcggggagaacgagcacgcggatgcacggctcctc
gatgtggcgctgcatgccgaatgctcggcggtgcatgccgatgtgctggatcatgatgtc
acctacaaggtcggcgtcgcgggccggcacatggcgatgaactcgctcgcggtgctcgcc
gcgtccacgctcgtgggcggagaccttgcgctgtcggccctcgcacttgcggccttcgaa
cccacggccggacgcggcgtgcggcatgcactcgggctgccgggcggcacggcgacgctg
atcgacgagagctacaacgccaatccggcttcgatggcggcggcgatgagcgtgctcggt
cgcgttgcgatcgggccgcaggggcggcgcatcgcggtgctgggcgacatgctggaactc
gggccgcaggggcgggagctgcaccgtggcctcgctgcggcgattaccgccaaccggatc
gacctcgtgttctgctgtgggcccttgatgcacgatctctgggatgcccttccctcggcg
cggaaggggggctattccgaaacttcggttgggctcgaatcgcagcttgtcgcgggcgtt
cgtgcgggcgatgcgatcatggtgaaaggctcgctcggctcgcgcatgaaagtgatcgtg
accgcgctagagaagaattttccgaacggcgcggatgccgacgatctcacggtatag
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