Afipia carboxidovorans OM5 (Mississippi): OCAR_5247
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Entry
OCAR_5247 CDS
T00783
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00470
D-Amino acid metabolism
oca00550
Peptidoglycan biosynthesis
oca01100
Metabolic pathways
oca01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OCAR_5247
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OCAR_5247
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
OCAR_5247
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
oca01011
]
OCAR_5247
Enzymes [BR:
oca01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
OCAR_5247
Peptidoglycan biosynthesis and degradation proteins [BR:
oca01011
]
Precursor biosynthesis
Amino acid ligase
OCAR_5247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
GARS_A
ATP-grasp_3
CPSase_L_D2
VpsR
Motif
Other DBs
NCBI-ProteinID:
ACI92379
UniProt:
B6JB38
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All DBs
Position
1223978..1224904
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AA seq
308 aa
AA seq
DB search
MTALQHVAVLMGGWSSEREVSLRSGAACAAALERKGYRVTRIDVQRDIATVLQNLKPDVA
LVMLHGKPGEDGTIQGVLETLGIPYSHSGVLSSSLAMRKDLAKTVMATAGVPVAEGLTLT
RAEIAKAHVMAPPYVIKPVADGSSVGVFIVTEDQAHPPQELFRDDWPHGEELLVEKYIAG
RELTCAVIKGEASDVIEIVPLLKFYDYEAKYSKGASKHVLPAPVLPFVYQEVRRLTLAAH
GALGCRGVSRADFRYDDRIEGTGGLVCLEVNTQPGMTETSLVPELAGYAGVAFDELVQWM
VEDASLDR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgacagcccttcaacacgttgccgtcctgatgggcggatggtcttccgaacgcgaggtc
tcgctgcgctcgggcgcggcctgcgccgcggcgctggagcgcaagggctatcgcgtgacg
cgcatcgacgtgcagcgcgacatcgcaaccgttctgcaaaatctcaagccggacgtcgcg
ctggtgatgctgcatggaaagccgggcgaggacggcaccattcagggcgtgctggaaacg
ctcggcattccctacagccattccggcgtgctctcgtcctcgcttgcgatgcgcaaggac
ctcgccaagacggtgatggcgaccgcgggcgtgccggtcgcggaaggcctgacgctgacg
cgcgcggaaattgcgaaggcgcatgtgatggcgccgccttacgtcatcaaaccggtggcg
gacggctcgagcgtcggggttttcatcgtcaccgaggatcaggcccacccgccgcaggag
cttttccgggacgactggcctcacggcgaggagcttctggtcgaaaaatacatcgccggg
cgtgaactcacctgcgccgtcatcaagggcgaggcgagcgacgtgatcgagatcgttcct
ctgttaaaattttatgattacgaggcaaagtattcaaaaggcgcgtcaaaacacgttctg
cccgcacctgttttaccatttgtttaccaggaagtccgaaggttgacgctggccgcgcat
ggggcgcttggctgtcggggagtaagtcgggcggatttccgttacgacgatcgcatcgag
gggacgggtggtctcgtctgtctcgaggtgaatacccaacccggcatgaccgagacgtca
cttgttccagagcttgcaggatatgcgggcgttgcatttgacgagttggttcaatggatg
gtggaggacgcctctctcgatcggtga
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