Afipia carboxidovorans OM5 (Mississippi): OCAR_5253
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Entry
OCAR_5253 CDS
T00783
Symbol
recN
Name
(GenBank) DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oca03400
]
OCAR_5253 (recN)
DNA repair and recombination proteins [BR:
oca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OCAR_5253 (recN)
TLS (translesion DNA synthesis) factors
Other SOS response factors
OCAR_5253 (recN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_22
AAA_29
nSTAND_NTPase5
DUF2813
ABC_tran
DUF7386
RsgA_GTPase
NACHT
Motif
Other DBs
NCBI-ProteinID:
ACI92385
UniProt:
B6JB44
LinkDB
All DBs
Position
1231518..1233197
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AA seq
559 aa
AA seq
DB search
MLARLSIRDIVLIERLDIDFAKGLAVLTGETGAGKSILLDAFALALGGRGDASLVRHGAE
QGQVTAAFDLPKKHPAFAILRENGLDDPGSGEMILRRVQFADGRTRAFLNDQPVSIQTLK
AIGGTLVEIHGQHDERALVDAATHRQLLDAFAGLEDSVGKVEALWDARRTAREALEEHRA
GMERAARDADYLRHASEELMKLAPEEGEETHLASRRTTMMQGEKVAEDLREALAAVAGPQ
SPVTSLAAAVRRLERRAASAPALVEGAVRAMDAALNSLAEAEQNLSAAIDAADYDPNELE
RIEERLFALRAASRKYGTPVDDLAALAQKFKDDVGLIDAGAEKLTGLEKAANAADAAYLD
AAKKLSAARAKAAEKLNKAVNAELPPLKLERAKFSTQIESELQSPGPQGFDRVQFWVQTN
PGTKPGPLMKVASGGELSRFLLALKVVLSDRGSAPTLVFDEIDTGVGGAVADAIGARLAR
LADKVQVMAVTHAPQVAARADQHLLISKEALDKGKRVATRVAPLVKENRREEIARMLAGA
EITREARAAAEQLLKAATA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgttggcccgcctttcgatccgtgacatcgtcctgatcgagcggctcgatatcgatttc
gccaaggggcttgccgtgctgaccggcgagaccggcgcaggcaaatccattcttctggat
gcattcgcgctggcgctcggcgggcgcggcgacgcgagcctcgtgcgccacggcgccgag
caggggcaggtgacggcagccttcgacctgccgaagaaacacccggcgtttgcgatcctg
cgcgagaacggcctcgacgatccgggctcgggcgagatgattctgcgccgtgtgcagttt
gccgacggccgcacccgcgccttcctcaacgaccagccggtcagcatccagacattgaag
gcgatcggcgggacgctggtcgaaattcacggccagcatgacgagcgcgcgctggttgac
gccgcgacgcatcgccaattgctcgatgcctttgcagggctcgaagacagtgtcggcaag
gtcgaggcgctgtgggatgcgcgccgcaccgcgcgcgaggcgctggaagagcatcgtgcc
gggatggagcgcgctgcgcgtgacgcggactatctgcgccatgcctccgaggagttgatg
aagctcgcgccggaggagggcgaggagacgcacttggcctcgcgccgcaccacgatgatg
cagggggagaaggtggccgaggatctgcgcgaggcattggccgccgtcgcaggaccgcaa
tcgccggtgacgtcattagctgcggccgtccgccggctggagcgacgggccgcgagtgcg
ccggcgctggtcgagggcgcggtgcgggcgatggatgccgcgctcaactcactcgccgag
gccgagcaaaacctgtccgccgcgatcgatgcggccgattacgatccgaatgagctggaa
cgcatcgaggaacggctgttcgcgctgcgcgccgcctcgcgcaaatacggcacgccggtc
gatgatctcgccgcgctggcacaaaaattcaaggacgatgtcgggctgatcgatgccggc
gccgagaagttgaccggtctggaaaaggccgcgaatgcagccgacgccgcctatctcgac
gccgcgaaaaaactctcggccgcgcgcgccaaggcggcggagaaactgaacaaggccgtc
aacgccgagcttccaccgctcaagctcgagcgcgcgaaattctccacgcaaatcgaaagc
gagctgcaatcgcccgggccgcaaggcttcgaccgcgtgcagttctgggtgcagaccaat
cccggcaccaagcctgggccattgatgaaggtggcgtcgggcggcgaactctcgcgcttc
ctgctcgcgctgaaagtggtgttgtcggatcgcggctccgcgccgacgctcgtgttcgac
gagatcgataccggtgtcggcggcgcggtggcggatgcgatcggcgcccggctggcgcgg
ctggccgacaaggtgcaggtgatggcggtgacgcatgcgccgcaggtggccgcgcgtgcg
gaccagcatctgctgatttccaaggaggcactcgacaagggcaagcgcgtcgccacccgc
gtcgcgccgctcgtgaaggagaaccgccgcgaggagatcgctcgtatgctggccggcgcg
gagatcacccgcgaggcccgcgctgcggcggaacagttgctgaaagccgcaacggcgtag
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