Afipia carboxidovorans OM5 (Mississippi): OCAR_5306
Help
Entry
OCAR_5306 CDS
T00783
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00061
Fatty acid biosynthesis
oca00071
Fatty acid degradation
oca01100
Metabolic pathways
oca01212
Fatty acid metabolism
oca02024
Quorum sensing
oca04146
Peroxisome
Module
oca_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OCAR_5306
00071 Fatty acid degradation
OCAR_5306
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OCAR_5306
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCAR_5306
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
oca01004
]
OCAR_5306
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oca04147
]
OCAR_5306
Enzymes [BR:
oca01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OCAR_5306
Lipid biosynthesis proteins [BR:
oca01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OCAR_5306
Exosome [BR:
oca04147
]
Exosomal proteins
Exosomal proteins of breast milk
OCAR_5306
Exosomal proteins of breast cancer cells
OCAR_5306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
SseB
Motif
Other DBs
NCBI-ProteinID:
ACI92438
UniProt:
B6JB97
LinkDB
All DBs
Position
1291460..1293031
Genome browser
AA seq
523 aa
AA seq
DB search
MDTVILQFDDDARPSRASASGQGAAPSLEGVDHLGLAFFDVARARGAHPAIETEKAAFTY
DWLLRAAESVRRYLCSREDFAPGARVALKLANSPEYVAAFYGTLLADGVVVPLPVALEPA
RLQQVEDACRPDILIVPKNLADNTSDVVTLVADTPSDLARPVVQRSRDDLAMLLFTSGST
GLPKGVMLSHGNLLANARAILHELPITPDERALVLLPFCHAFGNSILQTHILAGATMVFA
GALMFPATIPQAIAKFSATSFSAVPEVYGMLLKYGGLGDQKMPSLRYMSVAGGGLRHDLS
LRMAELIKPAEFYVMYGQSEASARLAVLPPAELKAREGSIGRALDGVALAVMDDAGAALP
PGEAGMLCARGPNVMLGYWQDSAATADVLGADGWLRTGDLARRDADGYFYIEGRANLLVK
VQGYRVHPAEVESIVEAAFPGARAVAVPVPHAGDTRFALFVAPQGAAVDVGSLQAACRAA
LASHKVPVHIEIVEELPLTSGYKVDRAALSARAAAAGQPPSPE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgttatcctgcaattcgacgatgatgcgcggccctcgcgcgcgagcgcgagt
gggcagggcgctgcgccgtcgctcgagggcgtcgatcatctcgggctggcgttcttcgat
gtcgcgcgtgcgcgtggtgcgcatcccgcgatcgaaaccgaaaaggcggcgttcacctat
gactggttgctgcgtgccgccgaaagcgtgcgccgctatctctgcagccgcgaggatttt
gcaccgggtgcgcgcgttgcgctaaagcttgcgaactcgccggagtacgtcgcggcgttt
tacggcacgctgctcgccgatggcgtcgtggtgccgttgccggtcgcgctcgaaccggcg
cggttgcagcaggtcgaggatgcctgccgccccgacatcctgatcgtgccgaaaaatctg
gcggacaacacatccgatgtggtgacgctcgttgccgatacgccaagtgatctcgcacgc
ccggttgtgcagcgtagccgtgacgatctcgcgatgctgctgttcacctcgggctcgacc
ggtttgccgaaaggcgtgatgctgagccacggtaatcttctcgccaatgcacgcgcgatc
ctgcacgaactgccgatcacgccggacgagcgcgcgctggtgctgctgccgttctgccat
gcgttcggcaattcgattctgcagacgcatatactggcaggcgcgaccatggtgttcgcg
ggcgcgctgatgtttccggcgacgatcccgcaggccattgccaaattttccgcgacgagt
ttttccgccgtgccggaagtctacggcatgctgctgaaatacggtggcctcggcgaccag
aagatgccgagcctgcgctatatgtcggtcgcgggcggcggattgcgccacgatctctcg
ctgcggatggcggagctaatcaagcctgccgaattctatgtgatgtatgggcagtcggag
gcgagcgcgcggcttgcggtgctgccgccggccgagcttaaagcacgtgaaggctcgatc
ggccgggcgctcgacggcgtcgcgcttgcggtgatggatgacgcgggcgcggcgttgccg
ccgggtgaagccggcatgctgtgcgcacgcgggccgaacgtgatgctcggctattggcag
gacagcgctgcgaccgcggacgtgcttggcgcggacggctggctgcggaccggcgatctc
gcgcgccgcgatgccgacggctacttctacatcgagggacgggcgaaccttctggtgaag
gtgcagggctatcgcgttcacccggccgaggtcgaaagtatcgtggaggcggcgtttccc
ggcgcccgcgcggtcgcggtgccggtgccccatgccggggatacgcgctttgcgctgttc
gtcgctccgcagggcgcggccgtcgatgtcggcagtctgcaggcggcctgccgggcggcg
ctggcatcccacaaggtccctgtccatatcgagatcgtggaggagcttccgctcacctcc
ggctacaaggtagaccgcgctgccctgagcgcacgggccgccgcggcaggacagccgcct
tcacccgaatag
DBGET
integrated database retrieval system
