Afipia carboxidovorans OM5 (Mississippi): OCAR_5355
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Entry
OCAR_5355 CDS
T00783
Name
(GenBank) conserved hypothetical protein
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
ApoLp-III
Baculo_PEP_C
Phasin
Motif
Other DBs
NCBI-ProteinID:
ACI92487
UniProt:
B6JBE6
LinkDB
All DBs
Position
complement(1342048..1346574)
Genome browser
AA seq
1508 aa
AA seq
DB search
MAKNSKVKDPTEVALSAIQEALNISDPSHVADDKITAPNEPLHTPDSDFDDARFGRPAAN
DDREAIGSVLQTLQRSRPRHSSYLFAGIFSALWVVAAAFLIFAFLPSLQAMIGSTNGGML
ALVGLACVFVTPLILFYFIASVSWRSQELSMIAQSMAQMAVRFSEPEHVANDAMVTVGQA
IRREVAAMGDGVERAIARAGELEALVTNEVSALERAYSDNEVRIRALLDDISAQRDALVG
QAEQVRNAISGVQIDLRQDIAIISDAIASRVDEVTNNITHMLEERSDHITGAFAAAGDNM
IIALGERGGDLLDRLEEASNQTANAVLEASEQLTANLNFKTSHIQEEFAELADNIHELLN
ERVERITGDFDQRANTIVDGITLRTEQVHDTLKNSGDSLLTEMDLRAADLAARVDEVSNR
LAERILISGEKTSEALDVTVNTLVAKVVGQTESSHEALVSGISSFENLIREQGSELAEKF
ARDSGTLGALITRHVAEFDRTVRSYGGEIVDRMGQHTQSIADNLKTYVDTFDTRVTAHGA
QIRDTLDERLGAFQSALDSRVTTLEVSLDTTIKSFDSTIDQRLSSLELSFDKRAEAVTQT
IDAQSTALADTLTTRFGEMQKGLETHAGSVASDIEARVVRFENLLDIRVESAANRIEASG
QKAGETLVSRTEELTQSIKSRVEDSERTLTNLVAETSEAIQLGARSAQQSLLALSGEVGS
QLRGTAGDIERAVQASAREAEGALFLASNNASAHIKSTAAEIERTIAGGTESFGLALTGK
IDAITGGVREQTEYLTLILDEKRTPLTEAIAAKTELLAAAIGEKNNELVTALDAKADQFA
ETLNAKTGLFAETLTTKTGLLSETLAARTGELAETLSGKSNELAQTLTLKSGELTQVLDG
TSRQLTQALDGSTSQLTSTLDSKSGQLVEALNTRSNAFAHAIGAATTSALKSIETQSGDF
TVQMMSHSSDISRQIAAASELATGSVSKALKDVEASTRAAIDQSRQVATAAVTEMQETSK
ILRTDTVALFERLREGNILLQEVLTGAHENLNSLERALVTRVADFVTALNDVTDRNSSST
TALEEHLRTFNESTTSALEGLTSLSTQFESHGRLLTEAVRQVEESNERTSQSVGERQTLM
DQLVTTIDTRTVDLDERLSRFVSLLEESLNAAELRARDIARVVAESAGASSSAVGRQFEA
VRVAVEEERRQTLEAMGEIYDRGTQDAAAMFGQASEKFSDVVHAMKEMAAELHRELDSTR
ADLRRGVLELPQEAAESTAQMRKVIVDQIEALAELNRIVARHGRGLDVAPRQREEEPVMV
AAGGRTESRPAAPRGRDYGSASSLPPPDLGATQPQRRAEAPPVSPAGSDQARDGWLSDLL
NRTDATVTERGRTARPANPLEALSLDITRLVDRDLAAEMWDRYQRGERKAFNKRLYTPAG
QKAFDEVARKYRADRGFKQTVDRYITEFERLLDDVSRDERGPAVLRNHLVSETGLVYTLL
AHAAGRLV
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaactcgaaggtcaaagacccaactgaagtcgccctctctgcgattcaggaa
gcgctgaacatctccgacccttcgcatgtcgcggacgacaagatcaccgcgccgaacgag
cctctccacacgcccgacagtgatttcgacgacgcccgtttcggccgccctgccgcgaac
gacgatcgcgaagccatcggcagcgtgctgcagacgcttcagcgcagccgcccgcgccac
agctcgtatctgttcgccggaatcttctccgccctctgggtggtcgccgccgcgtttctg
attttcgccttcctgccctcgctgcaggccatgatcggctcgaccaatggcggcatgctg
gccctcgtgggcctcgcctgcgtgttcgtcacgccgctcattctgttctacttcatcgca
agcgtgtcctggcgcagccaggagctcagcatgatcgcgcaatcgatggcgcagatggcc
gtgcgcttctcggagcccgagcatgtcgcaaacgacgccatggtcacggtcggccaggcg
atccgccgcgaggttgcggcgatgggcgacggcgtggaacgcgccatcgcgcgtgcgggt
gaactcgaagccctcgtcaccaacgaagtttcggcgctcgagcgcgcctacagcgacaac
gaagtccgcatccgcgccctgctcgatgacatttccgcccagcgcgacgccctcgtcggc
caggccgagcaggtccgcaacgcgatttccggcgtgcagatcgatctgcgtcaggacatc
gccatcatcagcgacgccatcgcctcgcgagtcgatgaggtgacgaacaacatcacccat
atgctcgaagagcgcagcgatcacatcaccggcgcgttcgccgccgccggcgacaacatg
atcatcgcactcggcgagcgtggcggcgacctgctcgaccgcctcgaggaagcgagcaac
cagaccgccaacgcggtgctggaggcgagcgaacagctcaccgccaacctcaacttcaag
accagccacattcaggaagagttcgccgaactcgcagacaacattcacgagcttctgaac
gagcgggtcgagcgcatcaccggcgacttcgaccagcgcgccaacaccattgtcgatggc
atcacgctacgcaccgagcaggtgcatgacacgctgaagaactccggcgactcgctgctc
accgaaatggatttgcgtgcagccgatcttgccgcccgcgtcgacgaagtcagcaaccgt
ctggcggagcgcatcctcatcagcggcgaaaagaccagcgaagccctcgacgtcaccgtc
aacacgctcgtcgccaaggtcgtaggacagaccgagagttcgcacgaggcgctcgtctcc
ggcatctcatcgttcgaaaacctgatccgcgaacagggcagcgaactcgctgaaaagttc
gcccgcgacagcggcacgctcggcgcgttgatcacccgccacgtggcggagttcgaccgc
acggtgcgcagctatggcggcgagatcgtcgaccgcatgggccagcacacccagagcatc
gccgacaacctcaagacatacgtcgacaccttcgatacccgcgtcaccgcccacggcgcg
cagatccgcgacacgctcgatgagcgcctcggcgccttccagagcgcgctggactcccgc
gtcaccacgctcgaagtgtcgctcgacaccaccatcaaatcattcgacagcacaatcgat
cagcgcctgtcctcgctcgaactgtcgttcgacaagcgcgccgaagccgtcacccagacg
atcgacgcgcagagcaccgcgctcgccgacaccctcaccacccgcttcggcgaaatgcag
aagggcctcgaaacccacgccggttcggtcgcttccgacatcgaggcgcgcgtggtgcgc
ttcgagaacctgctcgacatccgtgtcgagtcggctgccaaccgcatcgaggcgagcggc
cagaaggccggcgagactctcgtctcccgcaccgaggaattgacccagagcatcaagtcg
cgggtcgaggattcggagcgcacgctcaccaatctcgtcgccgagacgagcgaagcgatc
cagcttggcgcacgcagcgcccagcagtcgctgctcgctctgtcgggcgaagtcggctcg
caactgcgcgggacggccggcgacatcgagcgcgcggtgcaggccagcgcccgcgaggcc
gagggcgccctcttcctcgcctccaacaatgcgagcgctcacatcaagtcgaccgcggcc
gagatcgagcgcaccatcgccggcggcaccgagagcttcggccttgccctcaccggcaag
atcgatgcgatcaccggcggggtccgcgagcagaccgagtacctcacgctcatccttgac
gagaagcgcacgccgctcaccgaggcgatcgccgccaagaccgagttgcttgccgccgcc
atcggcgagaagaacaacgaactcgtcacggcactggacgccaaggccgatcagttcgcc
gagaccctgaacgccaagaccggcctgtttgccgagacgctaaccacgaagaccggccta
ctctccgagacgctcgccgccagaaccggcgagctggccgaaaccctgagcggcaagagc
aacgagcttgcccagacgctgaccctcaagagtggcgagctgacccaggttctcgacggc
accagccgtcaactcacccaggcgctcgacggctccacgagccagctcaccagcacgctc
gacagcaagagcggccagctcgtggaagcgctcaacacgcgcagcaacgcgttcgcccat
gcgatcggcgccgcaaccaccagcgcgctcaagtcgatcgagacccagagcggcgatttc
accgtgcagatgatgagccacagctcggacatctcgcgccagatcgccgccgcgagcgag
cttgcgaccggctccgtcagcaaggcgctgaaggacgtcgaggcgagcacccgcgccgcg
atcgaccagtcgcgtcaggttgcgaccgccgccgtcaccgagatgcaggaaacgagcaag
atcctgcgcaccgacaccgtcgcattgttcgagcggctgcgcgaaggcaacatccttctg
caggaagtgctcaccggagctcacgaaaacctcaactcgctcgagcgcgcgctcgtcacg
cgggtcgcggatttcgtcaccgcgctcaacgacgtcaccgaccgcaacagttcttccacc
accgcgctggaagagcacctgcgcaccttcaacgaatccacgaccagcgcgctggaaggt
ctcaccagcctctcgacgcagttcgagagccatggccggctgctgaccgaagcggttcgt
caggtggaggaaagcaacgagcgtacctcgcaatcggttggcgagcgtcagaccctgatg
gatcagctcgtcaccaccatcgacacccgcaccgtggacctcgacgagcgcctcagccgc
ttcgtcagcctgcttgaagaatcactgaacgccgccgagctgcgtgcccgcgacatcgca
cgcgtcgtcgccgaaagcgccggagcaagctcctccgctgtcggtcgccagttcgaggcg
gtgcgcgtcgccgtcgaggaagagcgtcgccagacgctcgaggcgatgggcgagatctac
gatcgcggcacgcaggatgccgccgcgatgttcggccaggcctccgagaagttcagcgac
gtcgtccatgccatgaaggagatggcggccgagctgcaccgcgaactcgactccacccgc
gccgacctgcgccgtggcgttctcgaactgccgcaggaagctgccgagagcaccgcgcag
atgcgcaaagtgatcgtcgaccagatcgaggcgttggccgaactcaaccgcatcgttgcc
cgtcatggccgcggcctcgacgtcgccccgcgccagcgcgaggaagagcccgtcatggtg
gctgccggcggacgcaccgaaagccgccccgctgcaccgcgtggccgcgactatggcagc
gcatccagcctgccgccgcccgatctcggcgccacgcagccgcagcgtcgtgctgaagcg
cctccggtgagcccggctggttcggatcaggcgcgtgacggctggctgtcggatctgctg
aaccgcaccgacgcgaccgtcaccgaacgtggccgcaccgcgcgccctgccaatccgctc
gaagcgctctcgctcgacatcacgcggctggtcgatcgcgacctcgccgccgagatgtgg
gaccgctaccagcgcggcgagcgcaaggcgttcaacaagcgcctctatacgcccgcgggc
cagaaggcgttcgacgaggtcgcgcgcaagtatcgcgccgaccgtggcttcaagcagacg
gtggaccgctacatcaccgagttcgagcggctgctcgacgacgtgtcacgcgacgagcgt
ggaccggcggtgctgcgcaaccacctcgtctccgagacgggcctcgtctacaccctgctc
gcacacgccgcaggccgcctcgtctga
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integrated database retrieval system
