Afipia carboxidovorans OM5 (Mississippi): OCAR_5440
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Entry
OCAR_5440 CDS
T00783
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00020
Citrate cycle (TCA cycle)
oca00480
Glutathione metabolism
oca00720
Other carbon fixation pathways
oca01100
Metabolic pathways
oca01110
Biosynthesis of secondary metabolites
oca01120
Microbial metabolism in diverse environments
oca01200
Carbon metabolism
oca01210
2-Oxocarboxylic acid metabolism
oca01230
Biosynthesis of amino acids
oca04146
Peroxisome
Module
oca_M00009
Citrate cycle (TCA cycle, Krebs cycle)
oca_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OCAR_5440
09102 Energy metabolism
00720 Other carbon fixation pathways
OCAR_5440
09106 Metabolism of other amino acids
00480 Glutathione metabolism
OCAR_5440
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OCAR_5440
Enzymes [BR:
oca01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
OCAR_5440
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Gene cluster
GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
ACI92572
UniProt:
B6JBN1
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Position
complement(1423193..1424410)
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AA seq
405 aa
AA seq
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MAKIKVANPVVELDGDEMTRIIWQYIKDKLIHPFLDVNLEYYDLGMEHRDKTNDQVTIDA
ANAIKKHGVGVKCATITPDEARVKEFNLKEMWKSPNGTIRNILGGVIFREPIICKNVPRL
VPGWNKPIIIGRHAFGDQYRATDFKFPGKGTLTMKFVGEDGSVIEKEVFKSPGAGVAMGM
YNLDDSIKDFARASFNYGLSRGYPVYLSTKNTILKVYDGRFKDIFQEIYGAEFKKEFEAK
GLTYEHRLIDDMVASALKWSGGYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLLTPDGKT
VEAEAAHGTVTRHYREHQKGKETSTNSIASIFAWTQGLAHRAKLDNNEALAKFAKTLERV
CVETVESGSMTKDLALLVGPDQKWLSTTGFLDKVAENLTKAMATA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaatcaaggtagcgaaccccgttgtcgaactcgacggcgacgagatgacccgg
atcatctggcagtacatcaaggacaagctgatccacccgttcctcgacgtgaaccttgag
tattacgacctcggcatggagcaccgcgacaagaccaacgatcaggtcaccatcgacgcc
gccaacgccatcaagaagcacggcgtcggcgtgaagtgcgcgaccatcaccccggacgaa
gcccgggtgaaggaattcaatctgaaggaaatgtggaagtcgccgaacggcaccatccgc
aacatcctcggcggcgtgatcttccgcgagccgatcatctgcaagaacgtgccgcgcctc
gtgcccggctggaacaagccgatcatcatcggccgccacgccttcggcgaccagtaccgc
gcgaccgacttcaaattccccggcaagggcacgctgacgatgaagttcgtcggcgaggac
ggcagcgtgatcgagaaggaagtgttcaagtcccccggcgccggcgtggccatgggtatg
tataacctcgacgactccatcaaggatttcgcccgcgcctcgttcaactacggcctgtcg
cgcggctatccggtctacctctcgaccaagaacaccatcctcaaggtctatgacggtcgc
ttcaaggacatcttccaggagatctacggcgccgagttcaagaaggaattcgaggccaag
ggcctcacctacgagcatcgcctgatcgacgacatggtcgcctcggcgctgaaatggtcc
ggcggctatgtctgggcctgcaagaactacgacggcgacgtgcagtccgacaccgtggcg
cagggctacggctcgctcggcctgatgacctcggtgctgctgacgccggacggcaagacg
gtggaagccgaggctgcccacggcacggtgacccgccactatcgcgagcaccagaagggc
aaggagacctcgacgaactcgatcgcctcgatcttcgcctggacgcagggcctcgcccat
cgcgccaagctcgacaacaacgaggcgctggcgaaattcgccaagacgctcgagcgggtc
tgcgtcgagacggttgagagcggctccatgaccaaggacctcgccctcctcgtcggcccg
gaccagaagtggctctccaccacaggcttccttgacaaggtcgcggagaacctgaccaag
gccatggcgacggcctga
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