Afipia carboxidovorans OM5 (Mississippi): OCAR_5479
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Entry
OCAR_5479 CDS
T00783
Name
(GenBank) high-affinity branched-chain amino acid transport system permeaseprotein LivM (LIV-I protein M)
KO
K01998
branched-chain amino acid transport system permease protein
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca02010
ABC transporters
oca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OCAR_5479
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCAR_5479
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oca02000
]
OCAR_5479
Transporters [BR:
oca02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
OCAR_5479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
DUF3382
Motif
Other DBs
NCBI-ProteinID:
ACI92611
UniProt:
B6JDW7
LinkDB
All DBs
Position
complement(1455248..1456576)
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AA seq
442 aa
AA seq
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MTDQTLPAPKPKRAPHTGAAFILKRASLSAAIALVLFSLMIGIRTDAGPTGQLIYWTRFG
DLAMMVVLVFAGSILVELGRQWFSARHHAPILPESAKRGLTTLGRLVVPALLIFACLAPV
IFYNQRYMLDLSILVLTYIMLGWGLNIVVGLAGLLDLGYVAFYAVGAYSYALLSTTFGLS
FWVCLPLAGILAAFWGILLGFPVLRLRGDYLAIVTLAFGEIIRLVLLNWQHVTGGPNGIS
GIPRPSLFGIPLTPGPNGLAAQLGIPFSPTHRLVLLFYIILALALLTNWVTIRLRRLPIG
RAWEALREDEIACRALGINTTTTKLTAFAIGAMFGGFAGAFFATRQGFISPESFTFQESA
LVLAIVVLGGMGSQLGVVLSSLALIGGFELFRGFEQFRMLAFGGAMVLLMIWRPRGLIAH
RDPTLFLGKPTTVSSELVKEGR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaccagacgctccccgcacccaaacccaaacgcgctccgcacaccggtgcggcc
ttcatcctgaaacgggcgtcgcttagtgccgccatcgcgctggtgctgttctcgctgatg
atcggcatccgcaccgacgcgggcccgaccggacaactgatctattggacgcggttcggc
gacctcgcgatgatggtggtgctggtctttgcgggcagcatcctcgtcgagcttggtcgg
caatggttttccgcacggcatcatgcgccgatcctgcccgaaagcgccaagcgcggcctg
acgaccctcggccgccttgtcgtacccgcgcttctgatcttcgcatgtctggctccggtg
attttctacaatcagcgctacatgcttgatcttagcattctggttctcacctacattatg
ctcggctggggcctgaacatcgtcgtcggcctcgcgggcctgctcgatctcggctacgtc
gcgttttacgcggtcggcgcctattcctacgcgctgctgtcaaccaccttcggcctgtcg
ttctgggtctgcctgccgctcgccggcatcctcgccgcattctggggaatcctgctcggc
tttccggtgctgcgcctgcgcggtgattatctcgccatcgtcacgctggcgttcggcgag
atcatccgcctcgtgctgctgaactggcagcatgtcaccggcggccccaacggcatttcg
ggcattccgcgcccgagcctgttcggcattccattgacgccggggccgaacggcctcgcc
gcgcaactcggcattccgttctcgccgacgcaccgcctcgtgctgctgttctacatcatc
ctcgcgctggcgttgctgaccaactgggtcacgatccgcctgcgccgcctgccgatcggc
cgcgcatgggaagcgttgcgcgaagatgagatcgcctgccgtgcactcggcatcaacacc
acgacgacgaagctcaccgccttcgccatcggtgcgatgttcggcggctttgctggcgca
ttcttcgccacccgacaaggcttcatcagcccggagtcgtttacgttccaggaatccgcg
ctggtgctggcgatcgtcgtgctcggcggcatgggctcgcagctcggcgtcgtgctatcc
tcgctcgcgctgatcggcgggttcgagctgttccgcggcttcgagcaattccgcatgctg
gccttcggcggggcaatggtgctgctgatgatctggcgaccacgcggcctgatcgcgcat
cgcgatccgaccctgtttctcggcaaaccaaccacggtctcctccgagcttgtgaaggag
ggccgatga
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