Afipia carboxidovorans OM5 (Mississippi): OCAR_5480
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Entry
OCAR_5480 CDS
T00783
Name
(GenBank) high-affinity branched-chain amino acid transport system permeaseprotein LivH (LIV-I protein H)
KO
K01997
branched-chain amino acid transport system permease protein
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca02010
ABC transporters
oca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OCAR_5480
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCAR_5480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oca02000
]
OCAR_5480
Transporters [BR:
oca02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
OCAR_5480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
DUF7269
Motif
Other DBs
NCBI-ProteinID:
ACI92612
UniProt:
B6JDW8
LinkDB
All DBs
Position
complement(1456585..1457499)
Genome browser
AA seq
304 aa
AA seq
DB search
MDYFAQQLINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLVLVSL
GMTAVPLVLLLVVLIAMAITALYGWTVERIAYRPLRQSFRLAPMLSAIGMSFVLSNFSQV
AQGARVKPVPPIVTGGYTLFESNGFVVRLSNIQIIVVLTTVVLLAIFSWVVTRTRLGRDM
RACEQDQTMASLLGVDVDRTISMTFVIGAALAAVAGMMYLLYYGVVDFFMGFVAGIKAFT
AAVLGGIGSLPGAMLGGLAIGLIETLWSAYFSSEYKDVAAFSILIVVLIFMPTGLLGRPE
VEKV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggattatttcgcccagcaactcatcaacggactggttctcggctcgatctacgggctg
atcgcgatcggctacacgatggtctacggcatcgttggcatgatcaacttcgcccacggc
gacatcttcatgatcggcggcttcattgcgctgatctcgtttctggtgctggtctcgctc
ggcatgactgccgtgccgctcgtgctgttgctcgtcgtgctgatcgcgatggcaatcacc
gcactctatggatggacggtcgagcggatcgcctatcggccgctacgccaatccttccgc
ctcgcgccaatgctctcggccatcggcatgtcgttcgtgctgtcgaacttctcgcaggtc
gcccagggcgcacgcgtcaagccggtgccgccgatcgtgaccggcggctatacgctcttt
gagagcaacggcttcgtggtgcgactctccaacatccagatcatcgtcgtgctgacgacc
gtggtgttgctcgcaattttctcgtgggtggtgacgcgcacgcggctcggccgcgacatg
cgtgcctgcgagcaggaccagacgatggcatcactgctcggcgtcgatgtcgaccgcacc
atctccatgaccttcgtgatcggcgccgcgctcgccgccgtcgcgggcatgatgtacctg
ctctattatggcgtcgtcgatttcttcatgggcttcgtcgccggcatcaaggcgttcacc
gctgcggttctcggcggcatcggctcgctgcccggcgccatgctgggcgggctcgccatc
ggcctcatcgagacgctgtggtcggcttatttctcatccgaatataaggacgtcgccgcc
ttctcgatcctgatcgtcgtcctgatcttcatgccgaccgggctgctcggccgtcccgaa
gtcgaaaaagtctga
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