Afipia carboxidovorans OM5 (Mississippi): OCAR_5502
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Entry
OCAR_5502 CDS
T00783
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OCAR_5502 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oca03019
]
OCAR_5502 (groL)
03110 Chaperones and folding catalysts [BR:
oca03110
]
OCAR_5502 (groL)
03029 Mitochondrial biogenesis [BR:
oca03029
]
OCAR_5502 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oca04147
]
OCAR_5502 (groL)
Enzymes [BR:
oca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OCAR_5502 (groL)
Messenger RNA biogenesis [BR:
oca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OCAR_5502 (groL)
Chaperones and folding catalysts [BR:
oca03110
]
Heat shock proteins
HSP60 / Chaperonin
OCAR_5502 (groL)
Mitochondrial biogenesis [BR:
oca03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OCAR_5502 (groL)
Exosome [BR:
oca04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OCAR_5502 (groL)
Exosomal proteins of other body fluids (saliva and urine)
OCAR_5502 (groL)
Exosomal proteins of breast cancer cells
OCAR_5502 (groL)
Exosomal proteins of colorectal cancer cells
OCAR_5502 (groL)
Exosomal proteins of bladder cancer cells
OCAR_5502 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACI92634
LinkDB
All DBs
Position
complement(1473094..1474797)
Genome browser
AA seq
567 aa
AA seq
DB search
MDGRNKSGHDVAIEISGDQTMSAKEVKFGVDARDKMLRGVDILANAVKVTLGPKGRNVVL
DKSFGAPRITKDGVTVAKDIELEDKFENMGAQMVREVASKSADLAGDGTTTATVLAQAIV
KEGAKAVAAGMNPMDLKRGIDLAVEAVVADLQKNSKKVTSNDEIAQVGTISANGDTEIGA
FLAKAMQKVGNEGVITVEEAKSLDTELDVVEGMQFDRGYISPYFVTNADKMRVEFDDAYV
LINEKKLSSLNELLPLLEAVVQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPG
FGDRRKAMLQDIAILTGGQAISEDLGIKLENVTLQMLGRAKKVMIDKENTTIVNGAGKKA
DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM
HATRAAVEEGILPGGGTALLRASEGLKRIKTQNDDQKTGVEIVRKALSAPARQIAINAGD
DGSVIVGKVLEKEQYAYGYDAQNHEYGNLVSKGIIDPTKVVRAAIQNAASVASLLITTEA
MIAELPKKGGAGAPGGMPGGGMGGMDF
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
gtggatggccggaacaagtccggccatgacgtcgcaatcgagatttcaggagatcaaact
atgtcagccaaagaagtaaaattcggcgtcgacgcgcgcgacaagatgctgcgcggtgtc
gacattctcgccaacgcggtgaaggtcaccctcggcccgaagggccgcaacgtcgtgctc
gacaagtcgttcggcgcgccgcgcatcaccaaggacggcgtcaccgtcgccaaggacatc
gagcttgaggacaagttcgagaacatgggcgcacagatggtgcgcgaagtcgcctcgaag
tcggcagacctcgccggcgacggcaccaccaccgcgaccgtgctcgcgcaggcgatcgtc
aaggaaggcgccaaggcggttgccgccggcatgaacccgatggacctcaagcgcggcatc
gacctcgcggtcgaggctgtcgttgcggacctgcagaagaactccaagaaggtcacctcg
aacgacgagatcgcccaggtcggcaccatctcggccaacggcgacaccgaaatcggtgcg
ttcctcgccaaggcgatgcagaaggtcggcaacgaaggcgtcatcaccgttgaggaagcg
aagtccctcgacaccgagctcgacgtcgtcgaaggcatgcagttcgaccgcggctacatc
tccccctacttcgtcaccaacgccgacaagatgcgcgtcgagttcgacgacgcctacgtc
ctcatcaacgagaagaagctctcctcgctgaacgagctgctgccgctgctcgaggccgtg
gtgcagaccggcaagccgctcgtcatcgtcgctgaagacgtggaaggcgaggctctcgcc
accctcgtcgtcaaccgtctccgcggcggtctgaaggttgccgccgtcaaggcgccgggc
ttcggcgatcgccgcaaggccatgctgcaggacatcgcgatcctgaccggcggccaggcg
atttcggaagacctcggcatcaagcttgagaacgtgaccctgcagatgctcggccgcgcc
aagaaggtgatgatcgacaaggagaacaccacgatcgtcaacggtgccggcaagaaggcc
gacatcgaggcgcgcgtggcgcagatcaaggcgcagatcgaggagaccacctcggactac
gaccgtgagaagctgcaggagcgtctcgccaagctcgcgggcggcgtcgcggtgatccgc
gtcggcggcgcgaccgaggtcgaggtgaaggaacgcaaggatcgcgtggacgacgcgatg
catgcgacccgcgcggctgtcgaggaaggcattcttccgggcggcggcaccgctctcctg
cgcgccagcgaaggcctgaagcgcatcaagacccagaacgacgaccagaagaccggcgtc
gagatcgtgcgcaaggctctctccgcgccggcccgccagatcgccatcaacgccggcgac
gacggctcggtgatcgtgggcaaggtgcttgagaaggagcagtacgcttacggctacgac
gcgcagaaccacgagtacggcaacctggtctcgaagggcatcatcgacccgaccaaggtc
gtgcgcgctgcgatccagaacgcggcttcggttgcctcgctcctcatcacgacggaagcg
atgattgccgaactgcccaagaagggcggcgccggcgcaccgggcggcatgcccggcggc
ggcatgggcggcatggatttctaa
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