Afipia carboxidovorans OM5 (Mississippi): OCAR_5817
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Entry
OCAR_5817 CDS
T00783
Name
(GenBank) H-NS histone family
KO
K03746
DNA-binding protein H-NS
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oca03036
]
OCAR_5817
03400 DNA repair and recombination proteins [BR:
oca03400
]
OCAR_5817
Chromosome and associated proteins [BR:
oca03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
OCAR_5817
DNA repair and recombination proteins [BR:
oca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OCAR_5817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS
Motif
Other DBs
NCBI-ProteinID:
ACI92943
UniProt:
B6JG92
LinkDB
All DBs
Position
1738537..1738914
Genome browser
AA seq
125 aa
AA seq
DB search
MSIKKLELESMPIDDLWSFHERISKILAERITSEKQELEERLAVLNRGRNAFGGDLAHSL
DSNNKVRRKYPRVFPKYRNPAAPSETWSGRGKQPRWLVAAIKSGRKIDDFRIRDQASAKG
RRQRA
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaagaaacttgaactagaatctatgccgattgacgacctgtggtcgtttcat
gaaaggatcagcaagatcctggccgagcgaattacttccgaaaaacaggagttggaggag
cgcttggcggttctgaaccgcggacgaaatgcgttcggcggcgatttggctcactcgctg
gattcgaataacaaggttcggcggaaatatcccagagtatttccgaagtaccgtaatccg
gctgcaccgtccgagacttggtctggtcgcggcaagcagccgcgatggctggtcgctgcg
atcaagtctggtcgcaagatcgatgatttccgtattcgtgaccaggccagtgcaaaggga
cggcgccagcgcgcttga
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integrated database retrieval system
