Afipia carboxidovorans OM5 (Mississippi): OCAR_5842
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Entry
OCAR_5842 CDS
T00783
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OCAR_5842 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oca03019
]
OCAR_5842 (rnc)
03009 Ribosome biogenesis [BR:
oca03009
]
OCAR_5842 (rnc)
03036 Chromosome and associated proteins [BR:
oca03036
]
OCAR_5842 (rnc)
Enzymes [BR:
oca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
OCAR_5842 (rnc)
Messenger RNA biogenesis [BR:
oca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OCAR_5842 (rnc)
Ribosome biogenesis [BR:
oca03009
]
Eukaryotic type
90S particles
RNase
OCAR_5842 (rnc)
Prokaryotic type
rRNA processing factors
OCAR_5842 (rnc)
Chromosome and associated proteins [BR:
oca03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
OCAR_5842 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ACI92967
LinkDB
All DBs
Position
1762699..1763565
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AA seq
288 aa
AA seq
DB search
MTDEVVSIAQVQDDKPPETKPAATKAAERKAVPEQPVVAEQPAAEASPKKVRRPSAKALL
REIEQRIGHTFKNPNLLKTALTHVSALKPSQNRTDSYQRLEFLGDHVLGLIVSDMLYGAF
PKADEGEMSKRLADLVRKEACVDVAKSLGLHENIKLGTVGAGVGARLRNSIVGDICEAVI
GAIFLDGGYDAAEQFVLSNWTERMRRPVRPLRDPKTILQEWAQGKGLPTPVYREVERTGP
HHDPRFRVAVDLPGLASAEGIGSSKRAAEKAAASALLNREGVTGGKDA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgaagtcgtgagcatcgcgcaggtgcaggacgacaagccgcccgaaacaaag
cccgcggcgacgaaggcggctgagcgcaaggctgtgccggagcagccggttgtcgcggag
cagcctgccgcggaagcctcgccgaagaaggtgcggcggccgagcgccaaggcgctcttg
cgcgagatcgaacagcgcatcggccacaccttcaagaatccaaatcttctcaagaccgcg
ctgacgcatgtttcggcgctcaagccgtcgcagaatcgcaccgacagctatcagcggctc
gaattcctcggcgaccatgtgctgggcctcatcgtctcggacatgctctacggcgccttc
ccgaaggccgacgagggcgagatgtcgaagcgccttgccgatctcgtacgcaaggaagcc
tgcgtcgatgtcgcgaagtcgctcggcctgcacgagaacatcaagctcggcacggtgggc
gcgggtgtcggtgcgcggctacgcaactccatcgtcggcgatatctgcgaagcggtgatc
ggcgcgatcttcctcgacggcggctatgacgcagccgagcagttcgtgctgagcaactgg
accgagcgcatgcgccgcccggtgcggccgttgcgcgatccgaaaaccattttgcaggaa
tgggcgcagggcaagggtctgccgacgccggtctatcgcgaggtcgagcgtaccggcccg
catcatgatccgcgtttccgcgtcgcggtcgatctgccggggcttgcctcggcggagggc
atcggctccagcaaacgcgcggcggaaaaggcggcggcgtctgccttgttgaaccgcgaa
ggcgtgaccggcggcaaggacgcctga
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