Afipia carboxidovorans OM5 (Mississippi): OCAR_5919
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Entry
OCAR_5919 CDS
T00783
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oca03032
]
OCAR_5919
03036 Chromosome and associated proteins [BR:
oca03036
]
OCAR_5919
03400 DNA repair and recombination proteins [BR:
oca03400
]
OCAR_5919
DNA replication proteins [BR:
oca03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OCAR_5919
Chromosome and associated proteins [BR:
oca03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OCAR_5919
DNA repair and recombination proteins [BR:
oca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OCAR_5919
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ACI93040
UniProt:
B6JGV6
LinkDB
All DBs
Position
1835381..1835680
Genome browser
AA seq
99 aa
AA seq
DB search
MAKKAATPATVTLKHLAAALAEEHELSKKTAEAILTDLVTKVTKHLKKGDRIRIVGLGIL
QVRKRAARMGRNPATGEAIHIKASKKVAFRASKELKEAI
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaagcagcgactccagcgactgttacgctcaagcaccttgccgccgcactc
gcggaagaacacgaactctccaagaagaccgcggaagcgattctgaccgacctcgtcacc
aaggtcaccaagcacctcaagaagggcgaccgcatccgtatcgtgggtctcggcatcctc
caggtccgcaagcgcgccgcccgcatgggccgcaatccagccactggcgaagcgatccac
atcaaggccagcaagaaggttgccttccgcgcctccaaggagctgaaggaagcgatctaa
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