Afipia carboxidovorans OM5 (Mississippi): OCAR_6002
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Entry
OCAR_6002 CDS
T00783
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00450
Selenocompound metabolism
oca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
OCAR_6002
Enzymes [BR:
oca01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
OCAR_6002
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
OCAR_6002
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ACI93122
UniProt:
B6JHF1
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All DBs
Position
1932759..1934000
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AA seq
413 aa
AA seq
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MHPAVTNGSYDVDRIRADFPALATKVYGKPLIYLDNAASAQKPNAVLDRMTQAYHSEYAN
VHRGLHYLANAATDAYEGGRTKVAAFLNAARREEIIFTRNATEAINLVASSWGEPNIKEG
DEIVLSIMEHHSNIIPWHFLRERQGAVLKWAPVDDEGNFLIEEFEKLLTAKTKLVAITQM
SNALGTVVPVKEVVRIAHARGIPVLVDGSQAAVHMTVDVQDIDCDFYVCTGHKIYGPTGI
GALYAKYDHLVAMRPYNGGGEMIREVAQDWVTYGDPPHKFEAGTPAIVEAIGFGAAIDYV
NSIGKERIAAHEHDLLTYATGRLREINSLRLIGTARNKGPVISFEMKGAHPHDVATVIDR
SGIAVRAGTHCVMPLLERFNVTATCRASFGMYNTRAEVDQLAQALVKAGELFS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcatccggcggtgaccaacggctcctacgacgtcgaccggattcgcgcggacttcccg
gcgctcgcgaccaaagtgtacggcaagccgctcatctatctcgacaacgcggcctccgcg
cagaagccgaatgccgttctggaccggatgacgcaggcgtatcattctgagtacgccaac
gtgcatcgcgggctgcactatctcgccaatgctgcgacggatgcttatgagggcggccgc
accaaggttgctgccttcctcaacgccgcgcgtcgggaagagatcatctttacccgcaac
gcgaccgaggcgatcaacctcgttgcgtcctcgtggggcgagccgaatatcaaggagggc
gatgaaatcgtcctctcgatcatggagcatcactccaacatcatcccgtggcatttcctg
cgcgagcgccagggtgcggtgctgaagtgggcgccggtcgatgacgaaggtaacttcctg
atcgaggagttcgagaagcttctcacagcgaagaccaagcttgtcgccatcacccagatg
tcgaacgcgctcggcaccgtggtgccggtgaaagaggtcgtgcggatcgcgcatgcgcgc
ggcattccggtgctggtcgatggcagccaggccgcggtgcacatgacggtcgacgtgcag
gacatcgattgcgacttctacgtctgcacaggccacaagatttacggccccaccgggatc
ggcgcgctctacgccaaatacgatcacctcgttgcgatgcgcccctataacggcggcggc
gaaatgatccgtgaggtggcgcaggattgggtcacctatggtgatccgcctcacaagttc
gaggccggcacgccggcgatcgtcgaggcgatcgggtttggcgccgccatcgactacgtc
aactccatcggcaaggagcggatcgccgcgcacgagcacgaccttctgacctatgcaacc
gggcggctgcgggagatcaactcgctgcggctgatcgggactgcgaggaacaaggggccg
gtgatctcgttcgagatgaagggcgcgcacccgcatgatgtcgcgaccgtgatcgaccgc
tcgggcattgccgtgcgggccggcacgcattgcgtgatgccgcttctggagcgattcaac
gtgacggcgacctgccgcgcctcgttcgggatgtataatacccgggcagaggtcgaccaa
ttggcgcaggcgctggtcaaggcaggagagctattctcatga
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