Afipia carboxidovorans OM5 (Mississippi): OCAR_6006
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Entry
OCAR_6006 CDS
T00783
Name
(GenBank) putative ATP-dependent RNA helicase RhlE
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_19
UvrD-helicase
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ACI93126
UniProt:
B6JHF5
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All DBs
Position
complement(1936085..1937494)
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AA seq
469 aa
AA seq
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MSFSHLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARRDVLGIAQTGTGKTAAFVLPML
TMLEKGRARARMPRTLILEPTRELAAQVQENIDHYCAGQKLNIALLIGGMSFGDQDAKLM
RGVDILIATPGRLLDHTERGKLLLTGVEMLVIDEADRMLDMGFIPDIERICKLVPFTRQT
LFFTATMPPEIRRITETFLHNPEKVEISRPASTATTVTQSQIGIGSDAHAKRELLRQLLR
DAKDLKNAIIFCNRKRDVAILHKSLQKHGFGAAALHGDMDQSARMTALDQFRKGELPLLV
ASDVAARGLDIPEVSHVFNFDVPYHPDDYVHRIGRTGRAGRLGTAISIVSPTDQKSILAI
EKLIGQSIPHAEGSAPSSASSHEDGEQASESRSAPRKSRRGGQRTRQREKTASKPANGSP
RPAAKAPAAQPPSLGRIPMAAAVQDHQSEPADHSHLPAFLLRPIRARAR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttctcatctcggcctttccgaaaaggtcctcgctgcggttgccgccaccggc
tacaccacccccacccccattcaagaacaagctattccccacgtcctcgcccggcgcgac
gttctcggcatcgcccagaccggcaccggcaagacggcggcgttcgtgctgccgatgctg
acgatgctggaaaagggccgcgcccgcgcccgcatgccccgcacgctcattctcgagccc
acgcgcgaactcgccgcacaggtgcaggagaacatcgatcactattgcgccggccagaaa
ctcaacatcgcgctcctgatcggcggcatgtcgttcggcgaccaggatgccaagctgatg
cgcggcgtcgatatcctgatcgcgacgccgggccgcctgctcgaccataccgagcgcggc
aagctgttgctgaccggcgtcgaaatgctggtgatcgacgaagccgaccgcatgctcgac
atgggcttcatcccggacatcgagcgcatctgcaagctcgtcccgttcacccgccagacc
ctgttcttcaccgcgacgatgccgccggaaatccgccgcatcaccgagaccttcctgcac
aatcccgagaaggtcgagatttcgcgccccgcttcgaccgcaaccacggtcacccagtcc
cagatcggcatcggcagcgacgcgcatgcaaagcgcgaactccttcgccagcttctgcgc
gatgccaaggatttgaagaacgccatcatcttctgcaaccgcaagcgcgacgtcgcgatc
ctgcacaagtcgctgcagaagcacggcttcggcgccgccgcgctgcacggcgacatggac
cagagcgcgcgcatgactgcgctcgatcagttccgcaaaggtgagttgccgcttcttgtc
gcttccgacgttgccgcccgcggcctcgacattccggaagtgagccacgtcttcaacttc
gacgtcccctatcatcccgacgactacgttcaccgcatcggccgcaccggccgcgccggc
cggctcggcaccgcgatctcgatcgtatcgcccaccgaccagaaatcgatcctcgcgatc
gagaagctgatcggccagtcgatcccgcacgcggaaggcagtgccccgtcgtcagcctca
tcgcacgaggatggtgaacaggcgagcgagtcccgctccgctccgcgcaaatcacggcgc
ggcggccagcgtacgcggcagcgcgagaagaccgcttccaagcctgccaatggttcgccg
cggcccgctgccaaggcacctgcggcgcagcctccctcgctcggacgcatccccatggct
gctgcagtgcaagatcatcagtcggagccagccgatcactcgcaccttccggcatttctg
ctccgccctatccgcgcccgcgcaagataa
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