Afipia carboxidovorans OM5 (Mississippi): OCAR_6126
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Entry
OCAR_6126 CDS
T00783
Name
(GenBank) DNA polymerase III subunit delta
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca03030
DNA replication
oca03430
Mismatch repair
oca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OCAR_6126
03430 Mismatch repair
OCAR_6126
03440 Homologous recombination
OCAR_6126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oca03032
]
OCAR_6126
03400 DNA repair and recombination proteins [BR:
oca03400
]
OCAR_6126
Enzymes [BR:
oca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OCAR_6126
DNA replication proteins [BR:
oca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OCAR_6126
DNA repair and recombination proteins [BR:
oca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OCAR_6126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ACI93241
UniProt:
B6JEC5
LinkDB
All DBs
Position
complement(2073726..2074769)
Genome browser
AA seq
347 aa
AA seq
DB search
MSPRNQSAETIAAPHPRETISLYGHAAAEAALLTAYKSGHIPHAWLIGGVQGIGKATLAY
RMARFVLANPDPASAKVQEAVSLQVDAPYPVARQIAAGSHGGMLTLERSANDKGVMRSVI
TVDESRETISFFGSTAAAEGWRVCIVDTVDELNANASNALLKILEEPPARSLFLLVSNMP
SRVLATIQSRCRKLMLRSLATEEVIAAAAEALQIDPSDQALREAAETAEGSVAHTLTLMG
GEALGLQQRTTALLDILPQLDHRALHALGDALPLNDRAALRTVIETIERWLSARLRDDEL
QSDLPRLARFAEVWEKMGKAARDTESFNLERKPLVFSVFGWLAEAAA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcgaaaccaatcggccgaaacgatcgccgcaccgcatccgcgcgagacgata
tctctttatggtcatgcggcagcagaggctgcgctgctcaccgcctacaagagcgggcac
attccgcatgcctggctgatcggcggcgtgcagggcatcggcaaggcgacgctggcctat
cgcatggcgcgcttcgtcctcgccaatcccgatcccgcgtccgccaaagtgcaggaggcc
gtctcgctgcaggtcgatgccccgtatcccgtggcgcggcagatcgcggccggaagccat
ggcggcatgctgacgctcgagcgcagcgccaacgacaagggcgtgatgcgcagcgtcatc
acggttgacgagtcacgcgagacgatttcgtttttcggctcgacggcggcggcggaaggc
tggcgcgtctgcatcgtcgacaccgtcgatgagctcaatgccaacgcctccaacgcgctc
ctgaaaatcctcgaagagccgcccgcgcgctcgctgtttctccttgtcagcaacatgcct
tcgcgcgtgctcgccacgatccaatcgcgttgccgcaaactgatgctgcgctcgctcgcg
acggaagaggtgatcgccgccgccgcggaagcgctgcagatcgatccatccgatcaggcg
ttgcgcgaagcggcggagacggcggagggcagtgttgcccacacgctgacgctgatgggc
ggcgaggcgctcgggctgcagcagcgcacaaccgctctcctcgacatcctgccgcaactc
gaccatcgcgctttgcatgcactcggcgatgcgctgccgctcaacgatcgtgcggcgcta
cgcactgtgatcgagacgatcgaacgctggctgtcggcgcggttgcgggacgatgaattg
cagtcggatttgccgcgccttgcgcgctttgccgaggtatgggaaaagatgggcaaggcc
gcccgcgatacggaatcattcaatttggagcgaaaaccgctggtgttttcggtatttggg
tggctcgccgaagccgccgcctga
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