Afipia carboxidovorans OM5 (Mississippi): OCAR_6129
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Entry
OCAR_6129 CDS
T00783
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
oca01011
]
OCAR_6129
Enzymes [BR:
oca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
OCAR_6129
Peptidoglycan biosynthesis and degradation proteins [BR:
oca01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
OCAR_6129
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Barwin
Motif
Other DBs
NCBI-ProteinID:
ACI93244
LinkDB
All DBs
Position
complement(2076854..2077666)
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AA seq
270 aa
AA seq
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MIDRQAARRVCQLMLGAGVCLLLANCAPGKFANRFDPKYGVSSSPRVVDFDQPVPKGGGT
YRVGKPYKVAGRTYVPEENLNYRADGLASWYGDDFHGRLTANGEVFDMTSLTAAHPTLPM
PSYVRVTNTANGKSLIVRVNDRGPYHGNRIIDVSHRAATLLDFRGHGVARVRVEYVGRAP
LEGSDDALLVATLRTNQPAPAPSSIRIASAAPFVPQMPTSHGVRADVPLPAERPYSLGST
DVAATSGLRAGYQADSYAEQADPGAGRGLY
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccgacaagcggcacgccgcgtttgccagctcatgctgggtgccggcgtgtgc
ctgctgctcgccaattgcgcgcccggtaaattcgccaaccgattcgacccgaaatacggc
gtgtcgtcgagcccgcgggtggtcgatttcgaccagccggtcccgaagggcggcggcact
taccgcgtcggcaagccctacaaggtcgccggccgcacctatgtgccggaagagaatctc
aattaccgcgccgatggcctcgcgtcctggtacggcgacgatttccatggtcgtctcacc
gcaaatggcgaagtgttcgacatgacctcgctcacggcggcgcatccgacgctgccgatg
ccgagctatgtccgcgtcaccaacaccgcgaacggcaaatcactgatcgtgcgcgtcaac
gatcgcggcccgtatcacggcaaccggatcatcgacgtttcgcaccgcgcggcgacactg
ctcgacttccggggccatggcgtggcccgcgtgcgggtcgagtatgtcggccgggcgccg
ctcgagggatcggacgacgcgcttcttgtcgccacgctgcgcaccaaccagccggcgcct
gcgccctccagcatccgcatcgcatcggcggcaccgttcgtgccgcaaatgcccacctcg
cacggggtgcgggcggacgtgccgctcccggccgagcggccctacagcctcggcagcacc
gacgtcgctgcaacctcggggctccgcgccggctatcaggccgacagctatgccgagcaa
gccgatccgggagcaggacgcggcctttactga
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