Afipia carboxidovorans OM5 (Mississippi): OCAR_6250
Help
Entry
OCAR_6250 CDS
T00783
Symbol
trmFO
Name
(GenBank) tRNA:M(5)U-54 methyltransferase
KO
K04094
methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:
2.1.1.74
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oca03016
]
OCAR_6250 (trmFO)
03036 Chromosome and associated proteins [BR:
oca03036
]
OCAR_6250 (trmFO)
Enzymes [BR:
oca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.74 methylenetetrahydrofolate---tRNA-(uracil54-C5)-methyltransferase [NAD(P)H-oxidizing]
OCAR_6250 (trmFO)
Transfer RNA biogenesis [BR:
oca03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
OCAR_6250 (trmFO)
Chromosome and associated proteins [BR:
oca03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
OCAR_6250 (trmFO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIDA
NAD_binding_8
DAO
AlaDh_PNT_C
FAD_binding_2
FAD_oxidored
Pyr_redox_2
Pyr_redox
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ACI93363
UniProt:
B6JFM9
LinkDB
All DBs
Position
2195931..2197364
Genome browser
AA seq
477 aa
AA seq
DB search
MADFSSIKDPIHVIGGGLAGSEAAWQIARLGHPVVLHEMRPVRTTEAHRTDGLAELVCSN
SFRSDDAANNAVGLLHAELRRLNSLIMASADAHQVPAGGALAVDREGFSAAVSAALAQHP
LIEIHREEIAGLPPADWSNVVVATGPLTSPALADAIRTRSGEDSLAFFDAIAPIVHRDSI
DMSKAWFQSRYDKVGPGGNGADYINCPLSREQYEAFIAALIAGEKTDFKDWESNTPYFDG
CLPIEVMAERGPETLRHGPMKPVGLTNAHNPTVKPYAIVQLRQDNKLGTLYNIVGFQTKL
KYGAQTQVLRMIPGLEHAEFARLGGLHRNTFLNSPKLLDAQLRLRAEPRLRFAGQMTGCE
GYVESAGIGLLAGLFAAYDALARTIAPPPPTTALGALLNHITGGHIETTDAGPRSFQPMN
INFGLFPPLASPPIKKADGTRLRGNEKTIAKKQAMSARALADLNGWIAAHLRVADAA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttctcttcgatcaaagaccctatccacgtcatcggcggcggcctcgcgggc
tccgaagcggcctggcagatcgcgcgccttggtcatccggtcgtgctgcacgagatgcgc
cccgtccgcacgaccgaggcacaccgcactgacggcttggccgagcttgtctgctcgaac
tccttccgctcagacgatgccgcaaacaatgctgtcggcctgctccatgccgagctgcgc
aggctcaactcgctgatcatggcctcggccgatgcccatcaggtcccggcgggcggcgcg
ctcgcggtcgatcgcgagggattttccgccgccgtcagcgccgcgctggcgcagcacccg
ctgatcgagattcaccgcgaggaaatcgcgggactgccgccggccgactggagcaacgtc
gtggtggcgaccgggcccctcacctcgcccgcgctggctgacgccatccgcacgcgcagc
ggcgaggactcgctcgccttcttcgacgcgattgcgccgatcgtgcatcgcgactccatc
gatatgtcgaaggcgtggtttcagtcgcgctacgacaaggtcggcccgggcggcaacggc
gcggactacatcaactgtccgctgtcgcgcgagcagtatgaggcgttcatcgcagcgctg
attgcgggcgaaaagaccgacttcaaggactgggaaagcaacacgccctatttcgacggc
tgcttgccgatcgaggtgatggccgagcgcgggcccgagacgctgcgccatggcccgatg
aaaccggtcggcctcacaaacgcgcacaacccgaccgtgaagccttacgccattgtgcag
ctccgtcaggacaacaagctcggcacgctctacaacatcgtcggcttccagacgaagttg
aagtacggcgcgcagacgcaagtgctgcggatgatccccggcctcgagcatgcggagttc
gcccgtctcggcggcctgcatcgcaacaccttcctcaactcgccgaagttgctcgatgca
cagttgcggctgcgcgcggagcctcggctgcgcttcgcaggccagatgacgggctgcgaa
ggctatgtggaatcggcgggcatcgggcttctcgccggcctgttcgccgcatacgatgcg
ctggcccgcacaatcgctccgccgccgccgacaacggcgctcggcgcgctcctcaatcac
atcactggcggccacatcgagacgaccgacgcgggaccccgctcattccagccgatgaac
atcaatttcgggctatttccgccactcgcctcgccgccgatcaagaaggccgacggcacg
cgcctgcgcggcaatgaaaagaccattgcgaagaagcaggcgatgagtgcccgtgccctt
gccgatctcaacggctggatcgccgcgcatctgcgcgtggcggatgcggcgtaa
DBGET
integrated database retrieval system
