Afipia carboxidovorans OM5 (Mississippi): OCAR_6251
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Entry
OCAR_6251 CDS
T00783
Name
(GenBank) squalene/phytoene synthase
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00906
Carotenoid biosynthesis
oca01100
Metabolic pathways
oca01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
OCAR_6251
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
oca01006
]
OCAR_6251
Enzymes [BR:
oca01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
OCAR_6251
Prenyltransferases [BR:
oca01006
]
Terpene biosynthesis
Squalene/phytoene synthase
OCAR_6251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ACI93364
UniProt:
B6JFN0
LinkDB
All DBs
Position
complement(2197486..2198352)
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AA seq
288 aa
AA seq
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MSESHSKAADNAAYCAQLVRDHDFERYATTLFVSQHLRRPLLALAAFNVELSRIRDHVSQ
PLTGEIRLQWWRDLIDDVARGSVEASPVAAELMAAVAEYDLPRRDLSRLADARVFDLYDD
PMPSLAVFERYCDDTAGRLFALSAQILGAAPDAVADAVHHAGVAQGIAEAIENLSLHAAR
KQLYLPQDVLAEAGAMEADIFAGRPTPQLTAAIGGLAVVAREHLGKALFLLREQKGEAAR
AFLPLAVVRRALSHDSLATGNPFTPQSISRLRMLWTMWRVTKSEAFRG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagtcacagcaaggccgccgacaacgccgcctattgcgcgcagcttgtgcgc
gaccacgatttcgagcgctatgctacgacgctgttcgtctcacagcatctgcggcgaccg
ctgcttgcacttgctgctttcaatgtcgaactgagccgtatccgcgatcacgtcagccag
ccgttgaccggcgaaatccgcctgcaatggtggcgcgatctgatcgacgatgtcgcgcgc
ggcagtgtcgaggcgagccccgttgctgccgagctgatggccgcagtggcagaatacgat
ctgccgcgtcgcgatctttcgcggctcgccgatgcgcgggtgttcgatctctatgacgat
ccgatgccgtcgctcgcggtgttcgagcgctattgcgacgatactgcgggacggctgttt
gcattgagcgcgcaaattctcggcgcggcgccagacgccgtcgcagacgccgtgcatcat
gcgggtgttgcgcaagggattgcagaggcgattgaaaatctgtcgctccatgctgcgcgc
aagcagctttatctaccgcaggacgtgctggccgaagcgggcgcgatggaggccgatatc
tttgccgggcgccccacgccgcaactgacagcggcgatcggcggccttgccgttgtcgcg
cgcgagcatcttggcaaggcgctgttcttgctgcgcgagcagaaaggcgaggcagcgcgt
gcttttctgccgctcgccgtcgtgcggcgggcgttgagccacgacagcctcgccaccggc
aatccattcacgccgcaatcgatatcgcggctgcggatgctgtggacgatgtggcgcgtg
acaaaatcggaagcgtttcgggggtaa
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