Afipia carboxidovorans OM5 (Mississippi): OCAR_6441
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Entry
OCAR_6441 CDS
T00783
Name
(GenBank) trag family protein
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OCAR_6441
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GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ACI93554
UniProt:
B6JHJ8
LinkDB
All DBs
Position
complement(2384638..2386653)
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AA seq
671 aa
AA seq
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MSTSRVAWGQIVVVFAIVLLAVWSATQWVAWRLGFQQQLGSSWFSLAGLPIYPPPAFFWW
WFFFDAYAPHIFLEGAGIAASGGLVAIVVAILMSIYRAREAKDVRTFGSARWAEPDEIEA
AGLLGDDGVVLGRLDRTYLRHDGAEHVLCFAPTRSGKGVGLVVPTLLTWPGASIVHDIKG
ENWELTAGFRARFGRVLLFDPTNANSAAYNPLIEVRKGEWEVRDVQNVADVLVDPEGSLE
KRNHWEKTSHSLLVGAILHVLYAEKDKTLAGVAAFLSDPRRPIESTLSAMMTTPHLGEKG
PHPVIASAARELLNKSDNERSGVLSTAMSFLGLYRDPVVAAVTARCDWRITDLVSGDKPT
TLYLVVPPSDISRTKPLVRLVLNQIGRRLTEDLHAKGRRHRLLLMLDEFPALGRLDFFES
ALAFMAGYQIKAFLISQSLNQIEKAYGQNNSILDNCHVRVSFATNDERTAKRVSDALGTA
TEMRAMQNYAGHRLAPWLGHLMISRSETARPLLTAGEVMQLPPDDEIVMVAGVPPVRARK
ARYYEDARFKERLLPVPQNPKAGLTPKPDDWSALKPVAAPTGNSAAAQQSAPPATGAAKP
DDDPANSGLRREPGLEWHKDIAPEPVRTPANEFDPDADEPERKVAANRVLAHDMRLMARR
IALDPGDGMEL
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaccagccgtgttgcgtggggccagatcgttgtcgtgttcgctatcgtgctgctc
gcggtctggagcgcgacgcagtgggttgcgtggcgcctcggctttcagcagcaactcggc
tcatcttggttttcgctggccggcctgccgatctatccgccgccggcctttttctggtgg
tggttcttcttcgatgcctacgcgccgcacatttttctggagggtgccgggatcgccgcc
tcgggtggcctcgtcgcgatcgtcgtcgcaatcctcatgtcgatctaccgtgcgcgcgag
gccaaggatgtgcgcacattcggctcggctcgctgggccgagccggatgagatcgaagcc
gcgggcctgctcggagacgatggagtcgttctcggccgcctggaccgaacctatctgcga
cacgatggcgccgagcatgtcctgtgcttcgcgccgacgcggagcgggaagggtgtcggt
ctcgtggtaccgacgttactcacatggcccggcgcgtcgatcgtgcatgatataaaagga
gaaaattgggaattgaccgcgggctttcgggcacggtttggccgagtgttgctgttcgat
ccgaccaatgcgaactcggccgcctacaatccgctgatcgaggtgcgcaaaggcgaatgg
gaagtgcgagacgtccagaacgtcgccgacgtgctagtcgatccggagggttcgttggag
aagcgcaatcattgggagaaaacatcccattcactgctggtcggcgccatcctccatgtc
ctctatgccgagaaggacaagacgctcgccggtgtcgccgcctttctgtcggacccgcgg
cgacccatcgagtcgacgctgtccgccatgatgacgacgccgcatctcggcgagaagggg
ccgcatcccgtcatcgccagcgcggcacgcgaactgctcaacaagtcggacaacgaacgc
tccggcgtcttgagcacggccatgtcattcctcggcctctatcgcgatcccgtcgttgcc
gcagtgacggcccgctgcgattggcgcatcacggatctcgtgtccggcgataagcccacc
acgctctacctagtggtgccaccatccgatatcagcaggacgaagccgctcgtgcgcctc
gtgcttaaccagatcgggcggcggctgaccgaagacctgcacgcgaaaggccgccgtcat
cgcctgttgctgatgctcgatgaatttccggcgctcggccggctcgacttctttgaatct
gcgctcgccttcatggccggctatcagatcaaggcatttcttatctctcaatcattaaac
caaatcgagaaagcctacggtcagaacaactccatcctcgacaattgccatgtgcgcgtg
agtttcgcgaccaacgacgagcgtaccgcgaagcgcgtatcggacgcgctcggcacggca
acggagatgcgcgccatgcagaactatgccggtcatcgtctcgcgccctggctcggacac
ttgatgatttcacgctccgagaccgcgcggccgctgctcaccgcaggcgaggtgatgcag
cttccgcccgacgacgagatcgtcatggtcgccggcgtgccgccagtccgcgccagaaag
gcgcgctattacgaagatgcgcggttcaaggaacggttgctgcctgttccgcagaacccg
aaagccggcctcacgccgaagcctgacgactggtcggcgctgaagccagtcgcggcgccg
acgggcaacagcgccgctgcacagcaaagtgcgccaccagcgacaggtgcggccaagccg
gatgacgatccagccaattcggggctccgccgcgaacctgggcttgagtggcataaggac
atcgcgccggagccggtgaggactcctgccaacgagttcgatcccgatgctgatgagccg
gagcgtaaggttgcagccaaccgggtgctggcgcacgacatgcgactgatggcccggcgg
atcgcgttggaccccggcgatggcatggagttgtag
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