Afipia carboxidovorans OM5 (Mississippi): OCAR_6533
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Entry
OCAR_6533 CDS
T00783
Name
(GenBank) tripartite ATP-independent periplasmic transporter
KO
K11689
TRAP-type transport system small permease protein
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OCAR_6533
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oca02000
]
OCAR_6533
Transporters [BR:
oca02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OCAR_6533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctQ
Motif
Other DBs
NCBI-ProteinID:
ACI93645
LinkDB
All DBs
Position
2472490..2473167
Genome browser
AA seq
225 aa
AA seq
DB search
MTGSWPTEIVVLHGGPVCGRVYLWGLNLQALLKLSRGIDAMTTTIGRWLSWLILIAVIIS
SANATIRKIFDVSSNAYLELQWMLFGAVFLLCSPWTLLKDEHIKIDIVNHHLPLKVRSWI
DLIGHVFFLMPFCIVVLWTSIPFFLVSYHQNEQSFNAGGLPQWPAKSLVVLGAALLLVQA
ISEIIKRVAVMQGLLPDPNKLALSAHEQAALEAERLAEAISSETK
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
ttgactggttcttggcccactgaaattgtggttttgcacggcggcccagtttgcggccgt
gtgtacctatgggggcttaatttgcaggctttgctcaagcttagtcgcggcatcgacgca
atgacgacgacgatcggacgctggctgtcatggctcattctgatcgcggtcatcatctca
tctgctaacgcgacgatccgcaaaatcttcgacgtctcctcgaacgcctatctcgaattg
cagtggatgttattcggcgcggtgttcctgctctgctcgccatggacgcttctcaaggac
gagcacatcaagatcgacatcgtcaatcaccacctgcccctcaaggtgcgaagctggatc
gacctgatcggccacgtcttcttcctgatgccgttctgcatcgtcgtgttatggacatcg
atcccgttcttcctcgtctcctatcatcagaacgaacagtcgttcaacgccggtggcctg
ccgcaatggcccgccaaatccctcgtcgtgctgggcgcagcgctgcttctcgtgcaggcg
atctctgaaatcatcaagcgcgttgccgtgatgcagggcctgctgcctgatccgaacaaa
ctcgcgctctccgcccatgagcaggctgccctcgaggcagagcggcttgccgaggctatt
tcgtcagaaaccaaataa
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