Afipia carboxidovorans OM5 (Mississippi): OCAR_6565
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Entry
OCAR_6565 CDS
T00783
Symbol
sucD
Name
(GenBank) succinate-CoA ligase, alpha subunit subfamily
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00020
Citrate cycle (TCA cycle)
oca00640
Propanoate metabolism
oca00660
C5-Branched dibasic acid metabolism
oca00720
Other carbon fixation pathways
oca01100
Metabolic pathways
oca01110
Biosynthesis of secondary metabolites
oca01120
Microbial metabolism in diverse environments
oca01200
Carbon metabolism
Module
oca_M00009
Citrate cycle (TCA cycle, Krebs cycle)
oca_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OCAR_6565 (sucD)
00640 Propanoate metabolism
OCAR_6565 (sucD)
00660 C5-Branched dibasic acid metabolism
OCAR_6565 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
OCAR_6565 (sucD)
Enzymes [BR:
oca01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
OCAR_6565 (sucD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
TrkA_C
Motif
Other DBs
NCBI-ProteinID:
ACI93677
UniProt:
B6JE44
LinkDB
All DBs
Position
complement(2507473..2508354)
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AA seq
293 aa
AA seq
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MAILVDKETKVLCQGMTGWAGTHHTARMMEYGTEVVAGVTPGKGGRTHLELPVYDTVAQA
KAETGANASMIFVPPANAAKAMIEAIEAELPLVVVVTERVPALDMVRVRQALDGSKTRLV
GPNSQGILAPEICKIGVMATGSERPGGVGIVSRSASLTSEVVAQISGEGLGQSTTVGVGG
DPIHGMSMVQCVELFLADPETEGIVLIGEIGGTEEQEVAEYLQARKASKPVVALIAGQYA
PPERRMGHSGTLTMYGRGDAGSKIAALERASVEIAPSSHLVGRTIRDALLRAR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcctcgtcgataaagagaccaaggtgctgtgccagggcatgaccggctgggca
ggcactcaccacactgcgcgcatgatggaatacggcaccgaggtggtcgcgggcgtgacg
ccgggcaagggcgggcgcacccatctcgaactgccggtgtatgacacggtggctcaggcc
aaagccgagaccggcgccaacgccagcatgatcttcgtgccgcccgccaacgcggcgaaa
gcgatgatcgaggcgatcgaggctgagcttccgctggtcgtcgtcgtcaccgaacgtgtg
ccggcactcgacatggtgcgggtgcgtcaggcgctcgatggctccaagacgcgcctcgtc
ggccccaactcgcaaggcattctcgcgcccgagatctgcaagatcggcgtgatggcgacc
ggcagcgaacggccgggcggtgttggcatcgtctcgcgctcggcctcgctgacaagcgag
gtggtggcgcagatttcaggcgaggggctcggtcagtcgaccacggtcggcgtcggcggt
gatccgatccacggcatgagcatggttcagtgtgtggagttgttcctcgccgatccggag
accgaaggcatcgtgctgatcggcgaaatcggcggcaccgaggagcaggaagttgcggag
tatctgcaggcccgcaaggcgtcgaagccggtggtcgcgctgatcgccgggcaatatgca
ccgccggagcgtcgcatgggccattccggcacgctcacgatgtatggccgcggtgatgcc
ggcagcaagatcgccgcgctcgagcgcgccagtgtcgagatcgcgccgagctcgcatctc
gtcggccgcaccatccgcgatgcactgctgcgcgcgcggtga
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