Afipia carboxidovorans OM5 (Mississippi): OCAR_6566
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Entry
OCAR_6566 CDS
T00783
Name
(GenBank) succinyl-CoA synthetase beta chain (SCS-alpha)
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00020
Citrate cycle (TCA cycle)
oca00640
Propanoate metabolism
oca00660
C5-Branched dibasic acid metabolism
oca00720
Other carbon fixation pathways
oca01100
Metabolic pathways
oca01110
Biosynthesis of secondary metabolites
oca01120
Microbial metabolism in diverse environments
oca01200
Carbon metabolism
Module
oca_M00009
Citrate cycle (TCA cycle, Krebs cycle)
oca_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OCAR_6566
00640 Propanoate metabolism
OCAR_6566
00660 C5-Branched dibasic acid metabolism
OCAR_6566
09102 Energy metabolism
00720 Other carbon fixation pathways
OCAR_6566
Enzymes [BR:
oca01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
OCAR_6566
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
Citrate_synth_N
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ACI93678
UniProt:
B6JE45
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All DBs
Position
complement(2508356..2509528)
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AA seq
390 aa
AA seq
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MNLHEFQAKQILAGYGLPSPGGKVAITAEQAVAIYNELGGGDMAVKAQVHAGGRAQAGGV
KIVHSEKEAKAVATSLLGKKLVTAQTGPAGRVVRRIYLEKAVEPVRELHVALLIDGSSGT
LTLFGSARGGDDIEERAARGELRLERLSLGDGSKRQADNVAAFATRIRIDAGSVAAFEKI
VDGLRRAFVDLDASLIEINPLAILRDGSFQALDVKMVLEDNALFRHPDLTALRDEDEIDH
REVEAQRHQLNFVSMDGNIGVVANGAGLGLASVDLVCAAGGKPANFMDIRTTATSLDVAY
GFGLLLDNPATRAIFLNVHGGGMQPCDTIAEGLGIAMRRTGRSLPIVARLAGNNAEFARS
RFVNFGCPVVDCPDMWTAATKVVAIAQKGG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctgcacgagtttcaggccaaacaaatcctggcgggctacgggttgccctcgccg
ggcggcaaggttgccatcacagccgaacaggctgtcgccatttataatgagctcggcggc
ggtgacatggccgtcaaggcgcaggtccatgccggtggccgcgcacaggcgggcggcgtc
aagatcgtccattccgagaaagaggcaaaggcggtcgcgacctcgctgctcggcaagaag
ctcgtcaccgcgcagaccggcccggccgggcgcgtggtccggcgcatctatctcgaaaag
gcggtcgagcccgtgcgcgagctgcacgtcgcactcctgatcgacggctcctccggtacc
ctcacattgttcggcagcgcccgtggcggcgacgatatcgaggagcgtgccgcgcgcggc
gagttgcggctcgagcgtctcagcctcggcgatggctccaagcggcaggccgacaacgtc
gcggcttttgcgacgcgcatccgcatcgatgccggttcggtggcggccttcgagaagatc
gtcgatggcctgcgccgcgcctttgtcgatctcgacgcaagcctgatcgaaatcaacccg
ctcgcgatcctgcgcgacggcagcttccaggcgctcgacgtcaagatggtgctggaagac
aacgcgctgttccgccatcccgacctcaccgcactgcgcgatgaggacgagattgatcat
cgcgaggtcgaggcgcagcgccaccagctcaacttcgtcagcatggacggcaatatcggc
gtggtcgccaacggcgcgggcttaggccttgcgagcgtcgacctcgtctgtgcggcgggc
ggcaagcccgcgaacttcatggatatccgcaccacggcgacgagcctcgatgtcgcctac
ggcttcggcctcctgctcgacaatcccgcgacgcgtgcgattttcctcaatgtccacggc
ggcggcatgcagccttgcgacaccatcgcggaaggcctcggcatcgccatgcgccgcacc
ggccgctcgttgccgatcgtggcgcggctcgctggcaacaacgccgagttcgcgcgttcg
cgcttcgtcaatttcggttgcccggtcgtcgattgtccggacatgtggacggccgcgacc
aaggtcgtggccattgcgcagaagggaggatga
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