Afipia carboxidovorans OM5 (Mississippi): OCAR_6686
Help
Entry
OCAR_6686 CDS
T00783
Name
(GenBank) transcriptional regulator, TetR family
KO
K21962
TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oca03000
]
OCAR_6686
Transcription factors [BR:
oca03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
OCAR_6686
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
YaaC
Motif
Other DBs
NCBI-ProteinID:
ACI93797
UniProt:
B6JGB5
LinkDB
All DBs
Position
complement(2630145..2630846)
Genome browser
AA seq
233 aa
AA seq
DB search
MVFKRMSSDSRRRQILDAAKQCFAQYGFAGTTTRKVASAACISEGLLFRHFPTKAALHAE
ILAEACEADPDLDRLLGLRPSSETLVILVREFVSHFLAIRTLADREKEERLRLTASSHLD
DGEFARLLFEKVAGLIAPLFIASLEAAIASGDALPIKTKPIHSFWFVHHLLHALALTRLP
DTPSLDYPADEALARELNGFILRALGVKADVITAHLDSAAPQSNPHHLIPEGA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggttttcaagcggatgagcagcgattcgcgccggcggcagatcctcgacgccgcgaag
cagtgcttcgcgcaatacggatttgcgggcacgacgacgcgaaaggtagcgagtgcggcc
tgcatttctgaggggctgctgttccgccatttcccgaccaaggccgcgctgcacgccgaa
atcctcgccgaagcctgcgaggccgaccccgatctcgaccggctcctgggcctgcggcct
tcgagcgagacgctcgtgatcctggtgcgggagttcgtcagccatttcctcgcgatccgc
actctggcggaccgggagaaagaggagcggcttcgcctcaccgcctcgagccatctggac
gacggtgagttcgcgcggctcctgttcgagaaggtggcgggtctgatcgcgcctttattc
attgcctcgctcgaggcggcgattgcctcgggcgatgcgttgccgatcaaaaccaaaccg
atccattcgttctggttcgtgcatcacctgcttcatgctcttgcgctgacgcggctgccg
gacacaccctctctcgactatccggcggacgaggcgcttgcgcgtgaactcaacggcttc
atcctgcgtgcactcggcgtgaaggcggacgtcatcaccgcccatctcgacagtgccgct
ccacaatcaaacccgcatcaccttattccagaaggcgcctaa
DBGET
integrated database retrieval system
