Afipia carboxidovorans OM5 (Mississippi): OCAR_6702
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Entry
OCAR_6702 CDS
T00783
Symbol
fdhA
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00630
Glyoxylate and dicarboxylate metabolism
oca00680
Methane metabolism
oca01100
Metabolic pathways
oca01120
Microbial metabolism in diverse environments
oca01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OCAR_6702 (fdhA)
09102 Energy metabolism
00680 Methane metabolism
OCAR_6702 (fdhA)
Enzymes [BR:
oca01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
OCAR_6702 (fdhA)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_9
Fer4_8
Fer2
Fer4_21
Fer4_6
Fer4_10
Fer4_2
Fer4_17
Fer4_16
Fer4_4
Fer4_13
Fer4_22
Fer4_18
CDC48_N
Motif
Other DBs
NCBI-ProteinID:
ACI93813
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All DBs
Position
complement(2648325..2651096)
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AA seq
923 aa
AA seq
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MNKIQFELDGRQVEAAPGETIWQVAKREGVEIPHLCYSPEPDYRADGNCRACMVEIEGER
VLAASCMRMPAVGMKVKSASERAASARKMVIELLVADQPERTTSHDPDSKFWQWADRVEV
AESRFPKAERWTGDYSHPAMSVNLDACIQCGLCVRACREVQVNDVIGMAYRNHGAKVVFD
FDDPMGESTCVACGECVQACPTGALMPASLLDEQHFTRTVYADRKVDSLCPFCGVGCQVT
YHVKDEKIVYAEGRDGPANHNRLCVKGRFGYDYIHHPHRLTKPLIRLPNAKKSAMDQVDP
ANPFTHFREATWEEALDVAAKGLVKIRDEKGPKALAGFGSAKGSNEEAYLFQKLVRTGFG
SNNVDHCTRLCHASSVAALMEGVNSGAVSAPFSAALDAEVIIIIGANPTANHPVAATFFK
NAVKKNGAKLIVMDPRKQPLSRLAYKHLQFKPGADVAMLNGMLHTIITEDLTDKQYIAGY
TEGFEELKEKIKEFPPEKMEKICGVPAETLKEVARLYAKAKSSIIFWGMGISQHVHGTDN
SRCLIALALVTGQIGRPGTGLHPLRGQNNVQGASDAGLIPMLLPDYQPVGRTDLRTPFEE
VWRKEIDPVPGLTVVEIMDAIHAGTINGMYIEGENPAMSDPDLQHAREALAKLDHLVVQD
LFVTETAFHADVILPASAFAEKVGTFTNTDRRVQMSRQVLNPPGDARQDIWIIQQIANRM
GCGWTYESVSDVYTEMASLMPSLDNISWERVDREGAVTYPADDPQKPGNEIIFTTGFPTA
SGRAKIVPAHVTPPDEVPDENYPMVLSTGRILEHWHTGSMTRRAGVLDSIEPEATALMSP
RDMRRLNIGPGDFIRLETRRGAIEVKARSDRDVPENMVFMPFCYAEAAANLLTNPALDPF
GKIPEFKFCAARVEKAELRSAAE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagattcagttcgagcttgatggccgtcaggtcgaagccgctccgggcgagacg
atctggcaggtcgccaagcgagaaggcgtcgagatcccgcacctgtgctattcgccggag
ccggattatcgcgccgacggcaattgccgtgcctgtatggtcgagatcgaaggtgagcgc
gtgctggcggcgtcctgcatgcgcatgccggctgtcggcatgaaggtgaagtccgcgagc
gagcgcgccgcatcggcccgcaaaatggtgatcgagcttctcgttgccgatcagcccgag
cgcacgacgtcgcacgatccggattcgaagttttggcagtgggccgatcgcgttgaagtc
gcggagagccgctttccgaaggcggagcgctggaccggcgactacagccacccggcgatg
agcgtcaatctcgatgcctgcatccagtgcggcctgtgcgtgcgtgcctgccgcgaagtg
caggtgaacgacgttatcggcatggcgtatcgcaaccacggcgcgaaggtcgtgttcgac
ttcgatgatccgatgggcgagtccacctgcgttgcttgcggtgaatgcgtgcaggcgtgc
ccgaccggtgcgttgatgccggcctcgctgctcgacgaacagcacttcacccgcacggtc
tatgccgaccgcaaggtcgactcgctgtgtccgttctgcggcgtcggctgtcaggtcacc
tatcacgtcaaggacgagaagatcgtctacgccgagggccgcgatggcccggcgaaccat
aaccgcctgtgcgtcaagggccgttttggttacgactacatccaccatccgcatcgcctc
accaaaccgctgatccggttgccgaacgcgaagaagagcgcgatggatcaggtcgatccg
gccaatcccttcacgcacttccgtgaagcgacgtgggaggaggcgctcgacgtcgccgcc
aagggacttgtgaagattcgcgacgagaagggtccgaaagcgctcgcgggtttcggctcc
gccaagggctcgaacgaagaggcgtatctgttccagaaactggtgcgtacgggctttggc
tccaacaacgtcgaccactgcacgcggctttgccacgcatcgtccgtcgcagcgttgatg
gagggtgtgaactcgggcgcggtgtcggcaccgttctcggcagcactcgatgctgaagtc
attatcatcatcggtgcgaacccgactgcgaaccatcccgtcgctgcgaccttcttcaag
aacgcggtgaagaagaatggcgccaagctcatcgtcatggacccgcgcaagcagccgctg
tcgcggcttgcctataagcacctgcagttcaagccgggcgccgacgtggcgatgctgaac
ggcatgctgcacacgatcatcaccgaagacctgaccgacaagcagtacatcgccggctac
accgagggcttcgaggaactcaaggagaagatcaaggagttcccgccggagaagatggag
aagatctgcggcgttccggccgagaccctcaaggaggttgcgcggctttatgccaaggcg
aaatcgtccatcatcttctggggcatgggcattagccagcacgttcacggcaccgacaac
tcgcgatgcctgatcgcgcttgcgctggtgaccggccagatcggccgaccgggcacgggc
cttcacccgttacgcggccagaacaacgtgcagggcgcctccgacgccggcctgatcccg
atgctgctgccggactaccagccggtcggccgcaccgatctgcgcacgccgttcgaggaa
gtctggcgcaaggaaatcgatccggtaccaggactgaccgtggtcgagatcatggatgcg
atccatgcaggcacgatcaatggtatgtatatcgagggcgaaaacccggcgatgtcggac
cccgacctgcagcatgcgcgcgaggcgctcgccaagctcgatcacctcgtggtgcaggat
ctgttcgtgaccgaaacggcattccatgccgacgtgatcctgccggcctccgcgtttgcc
gagaaggtcggcactttcaccaataccgaccgccgcgtgcagatgtcgcgtcaggtgctg
aacccgccgggcgatgcacgtcaggacatctggatcattcagcagattgccaaccgcatg
ggttgcggctggacctatgaaagcgtcagtgatgtttacaccgagatggcgagcctgatg
ccgtcgctggataacatctcctgggagcgtgttgaccgcgaaggcgcggtcacctatccg
gcggacgatccgcagaagcccggcaacgagatcatcttcaccaccggcttcccgaccgcg
agcggccgcgcgaagatcgtgcctgcgcacgtcacgccgccggatgaagttccggacgag
aattatccgatggtgctttccaccgggcgcattctcgagcactggcacacgggttcgatg
acccgccgtgccggggtgctggatagcatcgagccggaagcaactgcgctgatgtcgccg
cgggacatgcgtcgcctcaatattgggccgggcgatttcatccggctggagactcgccgc
ggtgctatcgaggtgaaggcgcgttccgaccgcgacgtgccggagaacatggtgttcatg
ccgttctgttacgcggaagcggcggcgaacctgctcaccaaccccgcgctcgacccgttc
ggaaagattcccgaattcaagttctgcgcggcgcgcgttgaaaaggcggagcttcgcagc
gcggctgaataa
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