KEGG   Afipia carboxidovorans OM5 (Mississippi): OCAR_6765
Entry
OCAR_6765         CDS       T00783                                 
Name
(GenBank) B12-dependent ribonucleoside diphosphate reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
oca  Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00230  Purine metabolism
oca00240  Pyrimidine metabolism
oca01100  Metabolic pathways
oca01232  Nucleotide metabolism
Module
oca_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
oca_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:oca00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    OCAR_6765
   00240 Pyrimidine metabolism
    OCAR_6765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oca03400]
    OCAR_6765
Enzymes [BR:oca01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     OCAR_6765
DNA repair and recombination proteins [BR:oca03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    OCAR_6765
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N
Other DBs
NCBI-ProteinID: ACI93876
UniProt: B6JGY7
LinkDB
Position
complement(2721142..2724897)
AA seq 1251 aa
MRIQRRYTKVDQPPYAAISFRLTTSEIRNPDGSVVFKLDNVEVPEFWSQVASDVLAQKYF
RKAGVAARLKKVEEETVPSWLWRSVPDTEALAALPEAERFGGEQSSKQVFDRLAGCWTYW
GWKGGYFTSEDDARAFHDELRYMLAQQMVAPNSPQWFNTGLHWAYGIDGPGQGHYYVDWK
TGKLTKSKSSYEHPQPHACFIQGIEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSRLRG
EGEKLSGGGRSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIETYIDWKVRE
EQKVAALVTGSKINQKHLKAIMKACVNCEGSGDDCFDPEKNPALKREIKLARRALVTDNM
IKRVIQFARQGYTDIQFDTFDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAVETDGEWNLV
GRTDGKVRKTLRARDLWEKIGYAAWASADPGLHFNTTMNDWHTCKASGDIRASNPCSEYM
FLDDTACNLASANLLTFYDPHTRRFDTDAYEHLCRLWTIVLEISVMMAQFPSKAIAELSY
EFRTLGLGYANIGGLLMTMGLPYDSKEGRALCGALSAIMTGTAYATSAEMAAELGTFPGY
KKNAKHVLRVIRNHRRAAHGVAVGYEALAVDPVPLDHASCPQADIVEHAKAVWDRALELG
ETNGYRNAQTTVVAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYWKIINRAVPEALR
ALGYRESEIAEIEAYAVGHGSLSNAPGINASTLKAKGFTDEALAKVEKALPTAFDVKFVF
NKWTLGEDFIRNSLNIAPEVMNAPGFDLLVALGFSKRDIEAANVHICGAMTVEGAPHLKD
EHYAVFDCANPCGKIGKRYLSVESHIRMMAASQPFISGAISKTINMPNDATVEDCKNAYL
LSWKLALKANALYRDGSKLSQPLNSQLIADEDDEDDAIEAFHDKPMAARATQVVEKIVER
VVEHVSRERERMPDRRKGYTQKAIVGGHKVYVRTGEYDDGRLGEIFVDMHKEGAALRSFI
NNFAIAVSLGLQYGVPLEEYVDAFTFTRFEPAGPVQGNDSIKYATSILDYVFRELAVSYL
SRYDLAHVDPSETSFDSLGKGVNEGKAQGPTGPSKYLSRGLTRSRSDNLVVMQGGASAAV
TAHNDSAPVGGSRVTATTSGAAESGAAALKTAEPERALSPTEKLEAEQWSRAGTAQVTAP
APATLSKAERRAEARARGYEGDMCSECSNFTLVRNGTCMKCDTCGATTGCS
NT seq 3756 nt   +upstreamnt  +downstreamnt
atgcgaattcaacgccgctacaccaaggtcgatcagccaccctacgccgccatttcgttt
cggctgacgacgagcgagattcgcaatcccgacggctccgtggtgttcaagctcgataat
gtcgaggtgccggagttctggtcgcaggtcgcctccgatgtgctggcgcagaagtatttc
cgcaaggcgggcgtggccgcgcgtctgaagaaggtcgaggaggagaccgtcccgtcctgg
ctgtggcgctcggtgccggacaccgaggcgctcgcggcgctgcccgaggccgaacggttc
ggcggcgagcagtcctcgaagcaggtgttcgaccggctcgccggctgctggacctattgg
ggctggaagggcggctacttcacctcggaggacgacgcccgcgccttccatgacgaactg
cgctacatgctggcgcagcagatggtcgcgccgaactcgccgcaatggttcaacaccggt
ctgcactgggcttacggtatcgatggtccagggcagggccattattatgtcgactggaag
accggcaagctcaccaagtcgaaatcttcctacgaacatccgcagccgcacgcctgtttc
atccagggcatcgaggacgacctcgtcaacgagggcggcatcatggacctgtgggtgcgc
gaggcgcgcctgttcaaatacggctctggcaccggctcgaacttctcgcggctgcgcggt
gagggcgagaagctgtcgggtggcggccgctcctcgggcctgatgagcttcctcaagatc
ggcgaccgcgcggcgggcgcgatcaagtcgggtggcaccacgcgccgcgcggcgaaaatg
gtcgtggtcgatgccgaccatccggatatcgaaacctatatcgactggaaggtgcgcgag
gagcagaaggtcgcggcgctcgtcaccggctccaagatcaaccagaagcacctcaaggcc
atcatgaaggcctgcgtgaactgcgaaggttcaggcgacgactgcttcgatccggagaag
aacccggcgctgaaacgcgagatcaagctcgcccgccgcgccctcgtcaccgataacatg
atcaagcgcgtgatccagttcgcgcggcagggctacaccgatattcagttcgacaccttc
gacaccgactgggattcggaagcgtatctgaccgtctccggccagaactccaacaactcc
gtctcgctgaaggatgatttcctgcgcgcggtcgagacagatggtgaatggaatctggta
ggccgcaccgacggcaaggtgaggaagacgctgcgtgcgcgcgatttgtgggagaagatc
ggctacgccgcctgggcgtccgccgatccgggcctgcacttcaacaccacgatgaacgac
tggcacacctgtaaagccagcggcgacattcgtgcgtcgaacccgtgctcggaatacatg
ttcctcgacgacacggcgtgcaatctcgcctccgccaatcttctgacgttttacgatccg
cacacccgccggttcgatacggatgcctatgagcatctgtgccggctgtggaccatcgtg
ctcgaaatctccgtcatgatggcgcaattcccgtcgaaggcgattgcggagctgtcttac
gaattccgtacgcttggcctcggctacgccaatatcggcggcctgctgatgaccatgggt
ctgccctatgactccaaggaaggccgtgcgctgtgcggtgccctctctgcgatcatgacc
ggcaccgcctatgcgacatcggcggagatggcggccgagctcggcactttcccgggttac
aagaagaacgcgaagcacgtgctgcgcgtgatccgcaaccatcgtcgcgccgcgcatggt
gttgcggtcggctacgaggcgctcgccgtcgatccggtgccgctcgatcacgcctcttgc
ccgcaggccgacatcgtcgagcatgccaaggcggtgtgggaccgtgcgctcgaactcggc
gagaccaacggctatcgcaatgcccagaccacggtggtggcgccgaccggcaccatcggc
ctggtgatggattgcgacaccaccggcatcgagcccgacttcgcgctggtgaagttcaag
aagctcgccggtggcggctactggaagatcatcaaccgcgccgtgccggaagcgttgcgt
gcgctcggctaccgcgaaagcgaaatcgccgagatcgaggcttacgcggtgggccacggc
tcgctgtcgaacgcgcccggcatcaacgcctccacgctgaaggccaagggtttcaccgat
gaagcgctggcgaaggtcgagaaggcgttgccgactgccttcgacgtcaaattcgtgttc
aacaagtggacgctgggcgaggacttcatccgcaacagcctcaacatcgcgcctgaggtg
atgaacgcaccgggcttcgacctgctcgtggcgctcggcttctccaagcgtgacatcgaa
gccgcgaacgtccacatctgcggtgcgatgacggtggaaggtgcgccgcacctgaaggac
gagcactacgccgtgttcgactgcgccaatccctgcggcaagatcggcaagcgctatctg
tccgtcgagagccacatccgcatgatggcggcatcgcagcccttcatttcgggtgcgatc
tccaagaccatcaacatgccgaacgacgccacggtggaggattgcaagaacgcttatctc
ttgtcgtggaagctcgcactgaaggcgaacgcgctttatcgcgacggctcgaaactgtcg
cagccgctgaactcgcagctcatcgccgacgaggatgatgaggacgatgccatcgaggcg
ttccacgacaagccgatggccgcgcgtgccacgcaggttgtcgagaagatcgtcgagcgt
gtggtcgaacatgtctcgcgcgagcgcgagcggatgccggatcgccgcaaggggtacacc
cagaaggcgatcgtcggcgggcacaaggtctatgtgcgcaccggtgaatacgatgacggc
cgcctcggcgaaatcttcgtcgacatgcacaaggaaggcgcggcgctccgctccttcatc
aacaacttcgctatcgcggtgtcgctcggcctgcaatacggcgtgccgcttgaggaatac
gttgatgcgttcaccttcacccgcttcgagcccgcgggtccggtgcagggcaacgactcc
atcaagtacgcgacctcgatcctggactacgtgttccgcgaactcgcggtgagctacctg
tcgcgctatgacctcgcccatgtcgacccgagcgaaaccagtttcgactcgctcggcaag
ggcgtgaacgagggcaaggcgcagggcccaaccggcccgagcaagtatctctcgcgtggt
ctcacacgctcacgctccgacaatctcgtggtgatgcagggcggcgcaagtgcggccgtc
accgcgcacaatgacagtgcgccggtgggcggatcgcgcgtcactgcaacaacatcaggt
gccgctgagagtggcgctgccgcgctgaagaccgcggaaccggagcgcgcgctctcgccg
acggagaagctcgaggcggagcagtggagcagggcgggcaccgcgcaggtgactgcaccg
gcaccggcaacgctctccaaggccgagcgccgcgcggaagcacgggcgcgcggctatgaa
ggcgacatgtgctcggaatgctccaacttcacgctggtacgcaacggcacttgcatgaag
tgcgatacctgcggtgcgaccacaggctgcagctaa

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