Afipia carboxidovorans OM5 (Mississippi): OCAR_6894
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Entry
OCAR_6894 CDS
T00783
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OCAR_6894 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oca03400
]
OCAR_6894 (xseB)
Enzymes [BR:
oca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
OCAR_6894 (xseB)
DNA repair and recombination proteins [BR:
oca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
OCAR_6894 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
SKA2
Sec10_N
DUF745
Motif
Other DBs
NCBI-ProteinID:
ACI94003
UniProt:
B6JFI3
LinkDB
All DBs
Position
2856694..2856945
Genome browser
AA seq
83 aa
AA seq
DB search
MASNASADVTTMTFERAIEELESIVKRLEDGKVPLEESVAIYERGETLKRRCEELLRQAE
ARVDKITTDANGAPVGTEPLDVR
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaacgcttcagccgacgtcacgacgatgacattcgagcgcgcaatcgaggaa
ctcgaatccatcgtcaagcgtttggaagacggcaaggtgccactggaggaatcggtcgcg
atttacgagcgtggcgaaacgctgaagcgccgctgcgaagagttgctgcggcaggcggag
gcccgtgtcgacaagatcaccacggacgcaaacggcgcgcccgtgggcaccgagcctctc
gacgttcgataa
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