Afipia carboxidovorans OM5 (Mississippi): OCAR_6896
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Entry
OCAR_6896 CDS
T00783
Symbol
rrmJ
Name
(GenBank) ribosomal RNA large subunit methyltransferase J
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oca03009
]
OCAR_6896 (rrmJ)
Enzymes [BR:
oca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
OCAR_6896 (rrmJ)
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
OCAR_6896 (rrmJ)
Ribosome biogenesis [BR:
oca03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
OCAR_6896 (rrmJ)
23S rRNA modification factors
OCAR_6896 (rrmJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ACI94005
UniProt:
B6JFI5
LinkDB
All DBs
Position
2859235..2859966
Genome browser
AA seq
243 aa
AA seq
DB search
MTERKRADVLLVERGLFESRARAQAAIEAGLVTANGKVIAKVSESIPVDADISAEPAHPW
VSRGGVKLAAALEHYPLDIEDHVCVDVGASTGGFTEVLLANGASLVFAIDVGTAQLHPSL
RGNPKIVSLENTDIRSLEGRRLEVRPDVAVIDTSFISLKLVLPAVFSFTAAPMQMLALIK
PQFEAGRAQVKKGIVRDEAVHRAICDDIAAFAAAQGCTDIEVFPSAIAGGDGNREFFLGA
RRG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacgcaagcgcgcggacgttcttctggtcgagcgcggcctgtttgagagccgc
gctcgcgcgcaagcggccatcgaggctgggctcgtcaccgccaacggcaaggtcatcgcc
aaagtctcggaatcaattccagtcgacgcagacatcagcgccgagcctgcacatccttgg
gtatcgcgcggcggcgtcaagctcgcggctgcactggagcattatccgctcgatatcgag
gatcacgtctgcgtcgatgtcggcgcctcgaccggtggtttcaccgaggtgctgcttgcg
aacggcgcgagcctcgtttttgcaatcgacgtcggcacggcccaactgcacccgagcctg
cgcgggaatccgaaaatcgtatcgctggagaacaccgatatccgctcgcttgaaggccgc
cgccttgaggtgcggccggatgttgcggtgatcgacacaagcttcatttcgctgaagctc
gtattgccagcggtgttctcgttcaccgccgcgccgatgcagatgctcgcgctcatcaag
ccgcagttcgaagccggccgcgcgcaggtgaaaaagggcatcgtgcgtgacgaagccgtg
catcgcgcgatctgcgacgatatcgcggcgttcgcggccgcgcagggctgcaccgacatc
gaggtatttccctcggccatcgcaggcggcgacggcaaccgcgagttcttcctcggagcc
aggcgcggctaa
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integrated database retrieval system
