Afipia carboxidovorans OM5 (Mississippi): OCAR_6897
Help
Entry
OCAR_6897 CDS
T00783
Name
(GenBank) hypothetical RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oca03009
]
OCAR_6897
Enzymes [BR:
oca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
OCAR_6897
Ribosome biogenesis [BR:
oca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OCAR_6897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_25
Methyltransf_31
Methyltransf_15
Cons_hypoth95
TRM5-TYW2_MTfase
BpsA_C
Motif
Other DBs
NCBI-ProteinID:
ACI94006
UniProt:
B6JFI6
LinkDB
All DBs
Position
2859966..2861207
Genome browser
AA seq
413 aa
AA seq
DB search
MSLERLTIDHVGQQGDGVSFDSGHALYVPYTLPNEVVDVTSSPGAQADRRGLVNIITPSA
ERIAPFCTYFGICGGCAIQHWQEDFYRAWKRQLVVDTLKQAGLVCEVGELIDAHGTGRRR
ATFHARQGSGGLRVGFAAAGRHEIVAIDRCPILDPAMEAALAAANAIAQLLKPVGKPLDI
QVSATENGLDIDVRGSGPLDTAILTKLSELADQHCLARLTRHGELVLLRAPPTIRVGRAG
VTLPPASFMQPTQAGEETLAALVIQRCKGAKRIADLFCGFGPFALRLAEKFRVAAFDSDG
KAIDALNNAVRATQGLKPLTAVARDLFRRPLVPQELREFDCVVFDPPRQGAEAQSRQLAA
SRLSRVVAVSCNPATFARDARILTGGGFRLASVSPVDQFRHTAHVELVADFIR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgagcgcctcaccatcgaccatgtcggccagcagggcgacggcgtgtcgttc
gacagcggacacgcactctacgtgccctacacgcttcccaatgaagtcgtcgacgttacc
tcctcgcccggcgcacaagccgatcgccgcgggctggtgaatatcatcaccccgagtgcg
gaacgcatcgcaccgttctgcacctatttcggcatttgcggcggctgtgcgatccagcat
tggcaagaggatttctatcgtgcctggaagcgccagcttgttgtcgacacgttgaagcag
gcaggcttggtttgcgaggtcggcgaactgatcgatgcccatggcaccggccgccgccgc
gccacattccacgcgcgacaggggtcgggcggactgcgtgttggtttcgccgcggcggga
cgacacgagattgtcgccatcgaccgctgccccattctcgatccggcaatggaggccgcg
cttgccgccgccaatgcgattgcgcagctactaaagcccgtcggcaaaccgctcgatatt
caggtgagcgcgaccgagaacggcctcgacatcgatgtacgtggctctggtccgctcgat
acggcgatcttaacaaagctgtccgagctcgcggaccagcattgcctcgcccgcctgaca
cgccatggcgaactcgttctgctgcgcgcgccaccaaccatccgcgtcggccgagcaggc
gtgacactgccgcccgcctccttcatgcagccaacacaagccggtgaagaaacgctcgct
gctctcgtcattcagcgctgcaaaggcgcgaagcggatcgccgacctgttctgcggcttc
ggcccgttcgcgctgcggctcgcggaaaaattccgcgtggccgctttcgacagtgacggc
aaggcgatcgacgcgctgaataacgccgtccgcgccacgcaggggttgaagccgctcacg
gcggtggcgcgcgatctgtttcgccggccgctggtgccgcaggagctacgcgagttcgac
tgcgtcgtgttcgatccgccgcgccagggcgctgaggcccaaagccgccagcttgccgcc
agccgcctgtcccgggtggtcgccgtctcgtgcaatcccgcgaccttcgcccgtgacgca
cgaatcctgaccggcggcgggttcaggctcgcaagcgtcagcccggtggatcagttccgc
catacggcccatgtcgaactcgtcgcggactttatccgctag
DBGET
integrated database retrieval system
