Afipia carboxidovorans OM5 (Mississippi): OCAR_7148
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Entry
OCAR_7148 CDS
T00783
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oca03009
]
OCAR_7148
Enzymes [BR:
oca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
OCAR_7148
Ribosome biogenesis [BR:
oca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OCAR_7148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ACI94252
LinkDB
All DBs
Position
3107110..3108210
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AA seq
366 aa
AA seq
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MAACSGSGWAATCSLMQRSSSDHPETGTDIGPGPAEAGDRRSITAAASGKSQRLDRLLAE
QIDDLSRTRLKALILAGHVSLGDTVVRDPAYQVKAGEAITIEVPPAVDPEPVGENIPLDI
VYEDDDIIVLDKQRGLVVHPAAGHENGTLVNALIAHCGASLSGIGGVKRPGIVHRLDKDT
TGLMVIAKNDHAHQSLTAQFADHGRTGELRRGYLAFVWGVPARPRGTIDQPIDRHPFARE
KMAVRASGRQAITHWEMLESFAGRDGKPLAALLACQLETGRTHQIRVHLSHAGHPLIGDD
VYGSGFRTKVNQLAEPAKIAVTTLGRQALHAYLLQIEHPTTGEVLEWQSELPEDLAHLQA
LLRAAP
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctgttcaggatcgggctgggcggctacatgttcgctcatgcaaaggtcttct
tcagatcatcccgaaacgggaacggacataggacccggtcctgcggaggcgggcgaccgc
cgctctatcacagccgcggcctcgggcaaatcgcagcggctcgaccggctgctcgcggaa
cagatcgacgatctgtcgcgtacccgcctgaaggcactgatcctggcgggccacgtcagc
cttggtgacacggtggtgcgcgaccctgcctatcaggtgaaggccggggaggccattacg
atcgaggtaccgccggccgtcgatccggaaccggtcggggagaacatcccgctcgatatc
gtctacgaggacgatgacatcatcgtgctcgacaagcagcgcggcctcgtggtgcacccc
gccgcgggtcacgagaacggtaccctcgtcaatgcgctgatcgcccattgcggcgcgagt
ctttccgggatcggcggcgtcaagcgaccgggcatcgtccaccggctcgacaaggacacc
accggactgatggtgatcgccaagaacgatcatgcccatcagtcgctgacggcacagttc
gccgaccatggccgcaccggggagctgcggcgcggctatctcgccttcgtctggggcgtg
ccggcgcggccgcgcggcaccatcgaccagccgatcgaccgccatccctttgcgcgggaa
aagatggcggtgcgcgcctccggccggcaggcgatcacccattgggagatgctggagagc
tttgccgggcgcgatggcaagccgctcgccgccctcctcgcctgccaactcgagacgggg
cgcacccaccagattcgtgtccatttgagccacgccggccatccgttgatcggggacgac
gtctacgggtcgggcttccgcaccaaggtgaaccagctcgccgagcctgcgaaaattgcc
gtcaccaccctcggcaggcaggcgctccatgcctatctcctgcagatcgagcacccgacg
acaggagaggttctggagtggcaatcggagctccccgaagatctggcccacctgcaggcc
ttgctacgcgcggcgccttga
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